Ll_transcript_398779

• Id Trinity: TRINITY_DN51944_c1_g2_i15
• Name Transcript: Ll_transcript_398779
• Sequence: GGGATCACAAAAGAGAAGGAAAAACATAGGAAAAATAACAATTATTATTCTCTCATTCTCACCATCCCCATCAAAATGAAACCCTCAAACCTCAACAACA ACAAGAACACACACCTTCTTCCTCCCATGGACACCAACCATCAAATCCAATCGCTCTCGCACCGACCCCAACCCCAACCCCATGCGCCTCCATCAACACC ATACCGGTTTCAACAACCACCACTTCCTCTTCTCCTGCATCATGAAACCCGACGAGGATGTTGTTCGCTTCTTCTCTACCGAGGCCCTAATCCTGGTACT CACCATCCGCTATTGTCTCCACTTTGGAAGGCAATAAGGAGTAATTAGTGGCCATTTGGAGAAACAAACTTGCAATCATGGAATGTAATAAAGATGATGC CTTAAAGGCTAAAGAGCTTGCAGAAGAGAAGCTTCTAAAGAAGGACTATGGTGGCGCAAGGATATCCGCAATGAGGGCTCGAGACCTGGATCCCAATCTT GCTGGCCTTCGTGAATTGCTGGCAGCCATTGAGGTGAATTTCTCTGCTGAAAGAAGAGTCAATGGGCAAGTTGATTGGTACGGGGTCCTTGGCGTGCAAC CTCTGGCTGATGATGCAACAATTCGAAGATGTTACCGGAAACTGGCTCGTGTGCTGCACCCCAATAAAAATAAATCAGTAGGTGCTGCCGATGCATATAA ACTAATCACACATGCATTCAGTTTATTATCTGATAAAGACATGAAAGTCATCTATGACCAAAATCGTAATTCATGGGGCAAATATGAAGAAATTCCAGGT GGGAAACCTTCTATACCAGCTTATCAGTTTGGTTTCTGTAATAATAATATATCGAATACTCCCAACTACAACGATAGAGATCATATGAATGGTACTCCCC CCATTCCTACTCCAGTATCTCCTGTGACATTGAAACAGACATTTTGGACCACATGTGAGTCTTGTGGGATGGAATTTGAGTACCATAATGTTTTTATCAA CTGCAAGCTTATCTGCTTCATCTGCCATCAGCCCTTTTTGGCTCTTGAGGTACTATCCCCATCTGTATACAAAAATGAGTCATCCACTTCAAGAACTGTT CCTATGATGGAACGAAACTTTAACTCAACTCGAATTGAAAGAAACTTTCATGCTTTAGGAAGGACCCCAATGTATGCTGTCAACTCATCACTTTGGTCAG GTCATCTCTCTACGCATGGTGGTATTTCCAGTGTGCTGGTTCCAGCTTCTTCTTCTGCTGCTGAAGCTCCTGGTGTTTATGGAATGTCTTCTGAGAATTT GAAGAGACGGTATGGCGATTCAACACCTGTCATCAGGGAGGAGGGCATTGTTGGGAAAACTCATGCTGGTGCGAGAAATGTTTCTGATTCATCTTCCAAA CCCTCTTGTTTTGGTCCAAATTCTGTTTCGATAGCAGATAGCTCAAGGAAAATAAGGCGCACAGATGGAAATCAAGTACATGGTGATGGAAGAGGCATGG AAGCCAAAATTGCATGTCAAAATGGAGGAATAAGATTTGCTAATCAGTTAGTATCTCAGAATGATAATGCTGCTGGATATTGTAAACGGAATGGTACTAA GGATGTATTACAGCAGCAATGGAGGACCATGTTGATCGAAAAGGCACGAAACTCTATTCATAAAAATCTTGGTGAATTGAAGGTCGCTTCTATACCAACA AATTCACGAAAGGAAAAGAACACTGATGCACAAATCAGAGTGAAGAAAGAGAGGGCTACAAGTGGGGTAAAACATGCTGCCCCAGAATTGGTTGAATCTG AGACTGTAGGCAATAAGTGTTTCTCTGCTGACTCAGAAGTTACTGAGTTTCTCACCATGTGTGTTGCAGACCCAGATTTCCATGATTTCGATGGGGACCG TATTGAAAACGCCTTTGGTAAGAATGAAATTTGGGCTGTCTATGATGATGATGATGGCATGCCACGCTTCTATGCTTTAATCAACTCTGTGATCTCAAAG AAACCTTTCAAAATGCGGATTAGTTGGCTTAGCTCTATGACCAATGAAGAATTGGCCCCAATTAAGTGGGTCAGTGCTGGCTTCGCCAAGACTGTTGGGG ATTTACAAGTTGGCAGGCGTGATTTTTCTACCTCTCTTAATTCCTTCTCGCACAGGGTTAATTGGACAAAAGGTTCAAAAGGCCTTATACATATATATCC TAAGAAGGGGGACGTTTGGGCTCTGTATCGAAATTGGTCTGCTGAATGGAATGAATTTACCAAAGATGAAGTCGTACATAAGTATGACATGGTGGAAGTG CTTGATGACTACAGCGAGGATCAAGGTATAAATGTTGCTCCGCTTGTTAAAGTTGCAGGTTTCAAGACAGTTTTCTGCCGGAATGCAGATCCAGGAAAGT TCTGGAATATACCAAAGGCGGAGATGTTTCGTTTCTCACACCAGGTACCTTCATACTTGCTTACTGGTCAAGAAGGTCGTAATGCTCCTAGTGGTTGTTT GGAGCTTGATCCTGCTGCTATACCCATGGAGCTTCTCAAGGCAGCCACAGAAGCTGCAGAGGAAGAAATGACAACTGAGAAACCATTAGCAGATGAACCT AAGCTCGGCGTGAATTCCAGTGAGGATGCTGTTGAACTTGTTCCAAAAAAGGAGGTGGCTGAAGCAATGGAGAAGAAGGAAAGCTGTCCTGAGGTTAAGT TTGTATACAAGCGAAGGCGTCCAAAGAAATGAATTTGAGCCCCATTTGAATCTAAGTTTTTATATTTTGTGATAAAAGTAGAGACTAAACTTTTCTGCAT TCAGAGACCAACTATGCAGCTTTTGTTTTGCTTATGGACTAATTTCAGCGTATCTAAGCCTGTCTAGAATACCAATTTACCTTAGATACTGCAGTTTTTA TGAGTCTATAATATTATTCAGCATCATTTAGCTCATTCGATGGAGAGGATTACATTTATTATTATGGTTTAAAAG
• Tissue: pods
• Gene name: LI_gene_188778;
• Additional information: details;

Expression of Ll_transcript_398779

FPKM

• PAB: 1.2
• PNAB: 1.1
• PS1: 1
• PS2: 2.6
• PS3: 2
• PW1: 0.8
• PW2: 1.7
• PW3: 1.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398779

• Blastp: DnaJ protein P58IPK homolog A from Oryza sativa with 35.43% of identity
• Blastx: Curved DNA-binding protein from Pseudomonas with 42.42% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (4328607)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415359.1)
• Pfam: DnaJ domain (PF00226.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;