Ll_transcript_399270

Id TrinityTRINITY_DN51945_c0_g1_i1
Name TranscriptLl_transcript_399270
SequenceATTTGCATAGAAAGAAAATGTAAGTTGAAGACTGTAGAAATGAAAATCAACGCTCTCTCTTTCTCTTTCTTCGAGCCTTTGAATTTTGAATCCTAATCAT GCACATGCTCTTCCAAATACAGGTCCTGTAACTCACTTCTATACCTTCAATTCTCGTTTTGTATTTCTCTTTTTTTCTTTAAGAGTTCCCATTTGCTACA AAATTATTTAGTTTCAGCAGATTTAGGGTTTTCAAAATTTCAATCGACACTGCTCATGCGTATGGTTCAGTAGAATTAGCTTGCTGCCTCAACTTGCATT GCTGTTTTGAATCTTAAAAAAGATTTATTTACTTTGTTCATGTAATGGGTAATGTTGAAATCCCCAATTGGCTCGAAGGGTTGCCTCTGGCACCGGAATT TCGTCCTACAAAAACCGAATTCTCAGACCCAATTGCTTATATTTCGAAGATTGAGAAGGAAGCTAGTACCTTTGGGATATGTAAGATTATCCCACCATTG CCCAAACCTTCAAAAAAGTATGTTTTTTCCAATTTGAATAGGTCATTATTGAAGTGCCCTGAATTGGGCCAAGTTAACAGTTCCTTAGGTGCTTGTAATT CTTTGAAAACGGGCTATAGGGATAGTTGTAGTGATTACGAGCCGCGAGCTGTGTTTACTACTAGGCAGCAAGAACTAGGGCAGAGTATAAAAAAGGCCAA AGGGACAGGTCAGAACCCAATATCATGTGTGCAAAAGCAAGTATGGCAAAGTGGGGAGGTTTATACACTGGAACAGTTTGAGTCTAAATCAAAGACTTTC GCAAGAAGCATGCTAGGGACTGTGAAGGACGTTTCTCCACTGGATATAGAGGCTATGTTTTGGAAGGCAGCTACAGAGAAGCCTGTATATATTGAGTATG CCAACGATGTGCCTGGCTCTGCTTTTGGAGAATCAAAGGGTGAATTTTGCTACAGTCCTACGAAGCAGAGAGGAAGGACTTATTATAAGAGTAAAATAGA TACCTCTGATTGTAAACAAACTGAACTGAATAGCTTAAGAGATGCCAAAAGTAATGAGACTAAGGGTGCTTCTTCCGAGACTCACGCAGGCCCATGTTTA AAGATGTACGAATCATCTACACCCGTGTCAACATTTCCATTGAATGAAGCTTCACAATGTTCTAGTGAAAAAAGTTCTGAAGTCAGCAATGATATCCAAG GCACTTCTGGCTGGAAGCTTTCAAATAGCCCTTGGAACTTGCAGGATATTGCACACTCATCTGGATCCTTAACGCGCTTCATGCCAGATAATATTCCTGG TGTTACTTCTCCCATGGTGTACATTGGTATGCTGTTCAGTTGGTTTGCCTGGCATGTAGAGGATCATGAGCTTCATAGCATGAATTTTCTTCACACTGGA TCATCGAAGAGTTGGTATTCTGTTCCCGGAGATTATGCATTTGCTTTTGAGGAAGTCATCCGCTGTCAGGCTTATGGCGATAACGTTGATCACTTAGCTG CTTTGAAACTTTTGGGGGAGAAAACAACTCTTTTATCACCTGAGGTAGTTATTGAATCTGGGATTCCTTGTTGCAGGTTAATACAGAACCCTGGTGAATT TGTTGTGACTTTTCCAAGAGCTTATCATGTTTTAACTGTGGGGAAGCTGCTAACTTTGGAACTCCACAATGGCTTACAATAGCTAAGGAAGCTGCAGTGC GTAGAGCTGTGATGAATTATCTTCCCATGCTCTCCCATCAGCAATTGCTTTACTTGTTGACCATGTCTTTTATTTCAAGAGTGCCAAGAACACTATTGCC CGGTGCGCGCTTTTCACGTCTAAAAGATCGTCAAAAAGAAGAAAGGGAGTTGTTAGTAAAAAAATCTTTTATAGAAGATATGCTGCAGGAAAACAAGTTG ATATCCATCCTTCTTGAAAAGGAAGCAACCAAACAGGCTGTTTTATGGAATGCTGATTTACTACCAAGTTTCAGTAAACATTGTCAGTTGTCGGATTTAG CTTCTACTACTGGTAGCTCTGTAGCAGACATGTCCAATATAAGTTCTTCAGATAAAAGTAGCCATTATCTGTTTGACGAGATGAGTTTGTATATGGAGAA TCAGACTGATTTATATTTTGGTGGCATCGACAACGATCTTTCATGTGACTTCCAAACTGATTCAGGACCCTTGCCTTGTGTGGGTTGTGGAGTACTTGGT TTTCCATTTATGGCTGTGGTGCAACCATCTGAGAAATTGACAGTGGAACTTTTTCCTGTTGATCATCATCTAGTTCAAGATTCCTCTCTGAACTCTACTG TCTCCCTTCATAGCTCAGTCTCAACAAAGGAATCCTCCAATATATCATTGAAGGCATTTGATAATTATTGGAATGCCTCCAGTAAATTTTTGAGACCACG GATTTTCTGCCTGGAGCATGCTGTTCAGATAGTGAATATGTTGCAGTGCAAAGGTGGAGCCAATGTGCTAATAATTTGCCATTCAGACTACCAGAAAATT AAGGCACATGCCAGTGCAGTTGCAGAAGAGATACATAGTGCTTTTGATTATAACGAGGTTCCGTTAGATATTGCATCCCCAGAAAATTTGACTCTGATTG ATTTGGCAATTGATGGTCAACAACGTGATGAATACGAAGACTGGACATCTAAACTAGGCATTAACCTCCGGTATTGTGTCAACGCAAGAAATAATTCTCC ATCTAAACAAGTTCCCTGGACACTAGATTTAGGGATGCTGTTCTCTGATAAACATTCTGATTTAGAATTTTTATCATTAAATTGGCAGTCACGGAGATCT CGGTCCAAAAGGTTAAATTATTCAGCTCAGACTAAAACCTCTGACAAAATTCAGAGAAAGAAGGATGGTCAGTTGGAGGGAAGAAAAGATGGTTCCACTG CCAAAAAGAAGCTAATTCATTATTCAAGAAGGAAGTTCAAATCAAAGCAAAACTGTTCCTCGGGACTGAGCATGGTCCATACATTCCAAGAGAAGTCCAC AAATGTGTCAGCTGTCTTGAGTGGAGAACACTACGATTGTGTTTCTAAATGTGAGCTTGACACTGGCAATTTCAGGAGTGAATGTGCATTGTCAGGCGTG TGTGCTTCTACTGCAAGGTCTCCAATGCATCAGGAAATGTCTACAAAGAATCTGGATGATGAGGTGCATAAAGAATATCAGTCTACCTGCAAAAGCAACA ATGAGGAAGCTACTTTATCTACTGTTTCATTGGTAAATGAACCTATGCTTGCTTCTATGGATGAAAGTTTTGAAAGTCCAAACAACAATTATGCTGTTGA AAAAGTTAGCGATGGAATTTCATTAAAGGAGACAACTGGGCAAGAAATTAATTCTTTGAGTGAGAGGGAAAAGGAACCTCTCGGTGATGATAAACCAATA AGTGAATATACTCCAAACAGAGACGTTTGTGAAGTTCCAAGACAGCCTTTTGCTGCTCCAGACTTGAATGATACTTTTATAGATGCTGAGAGGCAGTGCC AAGCCCAAAATAAGAGTAAACTTAATGGGGAGCCTGTTTCTAGTTATGTTGCAAAAGGTGAAAATACAAGTGTAACTTTGTCAGAATTAGGATGTTCTGA AGTAATAATGGAAACATGTCCTGAAGAAGACATATGTATTCAATTTATTTCAGATAAAGGAAGGAAACTGGAAATCCAACCAACTGATAGAAGTGATGAG GAAATTTGCTCTGGTACTAAGACACCGTTAAAGGACTCTTCCATATCAATCCAGGAATGTTCTAAAAACGAGAAAGAGATGTGTGTAGGACAAAATATAA ATGGAAGTGAAGTTCATTTGTTGCAAGATAACAGGGAACCAGAAAGCTCTGACTTGACTGCAGTAGTTCCCCATTCAAGTGCTCGGAAGAAAAGAAAGAG GGAAGTGGAACAGCTAACAGAGAACCAATCTGATTGCAGCAACTTTATAAGAAGTCCATGTGAAGGGCTGAGGCCTAGAGCTGGTAAGATCACTGCAGAT AAAAGAAGTGGGGAGAGCAGTCAAAATGCCAAAGAACACCAGGATGATAGAAGGGCAAATAGAGTTCCGGTTCCTCGCAAGAATAAAACTGATGATGTCA GAAAGCCCCACAGTTGTGACCTTGACGGCTGTGATATGAGTTTCACCACTAAGGCTGAGTTACAGTTGCACAAACGTAACATTTGCCCATATAAAGGGTG TGGTAAGAAGTTCAGCTCCCACAAATATACCTTGCTTCACCAGCGTGTTCACGATGATGAAAGGCCCCTCAAATGCCCATGGAACGGTTGTTCCATGACA TTCAAGTGGGCATGGGCAAGGACAGAGCATATACGTGTGCATACCGGGGAGAAACCTTATCAATGCAAGATCGAGGGATGTGGCCTTTCCTTCAGGTTTG TATCAGATTTTAGTCGGCACAGGCGGAAAACAGGACACTATGTGCAACCCTCTTGAGATATAAAATTCATTTTGTATTTCATCATTTTGTAATTGTGCAC ATATACAATTATGTGTAAGGCATTAGAGTTGGCATTGGTAACTTTTCAGAGTTTTAATCAGCAGATGTAGCAGCTGCCTCTACAGGAGGGAAATCTTTCC ATTAGAGAGTGCTACATCATATCCCTGCTGGCTTATTTTTTGTGGTTAACTGTATTTATGGTTCTTTTGAAGCAGTTGATATATCCTTCATCTTTATGGA TAGTTTGTTCATTGTTGTTGTATATTAGTTTGGATTAAAACCACATTTGTTTTATAGAGTAAGAATCACAGGCTTACATGCTCTCAATGGTTCTATTTGA TTTCTTTTGACTAGTAAATTCAATGGTTAAACATCCGTTTACAGTTGAG BLAST
Tissuepods
Gene nameLI_gene_188785; 
Additional informationdetails; 

Expression of Ll_transcript_399270

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_399270
BlastpProbable lysine-specific demethylase ELF6 from Arabidopsis with 51.98% of identity
BlastxProbable lysine-specific demethylase ELF6 from Arabidopsis with 39.38% of identity
EggnogZinc finger protein(COG5048)
KeggLink to kegg annotations (AT5G04240)
CantataDBLink to cantataDB annotations (CNT0000082)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019428052.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;