| Id Trinity | TRINITY_DN51949_c2_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_398723 |
| Sequence | TGACCATCGTACTTTTCTCTCTCTTCCCATTTCCCCCTCTCTTCTCACCCTTTTCTATTTCCTCTCATCGTCACCCTTCTCCTTTTCGCCGCTGTTGCAG TCTCAAAAACTCTACTAGCAAAAACCAACCTCAGCTTAATAGAGAGAGAGAAAAAAACACGTAGAAAGAGACACTTTCAACAACAAAATCTATCAAAAAA CATCTATATATATAAATTTTTTCTATCATTTATTCATTCTTTAGCAGAAAAAAAGAAACAAACACTTCCCTTCTTCTTTTCCCTTGATTTAGATAGATAT CCTTCTTTCATTCATTATCATTATTATTAAAACTTCTTCTCTCACTCTCTTTTTTTCCCCTTAAACCCTGATCTGACGGCTGCGATCTTCTCATTTCTCC AATCGTACGGCCAGGGGTGCTTTACTCTTACCTTGGCAACTCTCTCTATATACTTTGAGATTGACTTCTCTGGAACAATAAATATGGAGTCCAATGGTCA TAGAAGAGTGAAGAGACCTGACTATGTTAAAGAGAATGGTGATTTCTATCTGTCAAATGGTGATGATGAACATGATCCTTGGACAGCATGGGCTTACAAG CCTCGAACGATCACATTGTTGCTTATTGGTGCTTGCTTTCTAATTTGGGCGAGTGGAGCACTTGATCCAGAAAGAGATGCATCTGGTGACCTTGTTACAT CCGTTAAAAGGGGTGTATGGGCAATGATTGCTGTTTTTCTTGCTTATTGCCTGCTGCAAGCTCCTTCCACGTAAGTGAATTTATTTTGTATTGTTGGGTA TTTTGCATTAACATCTAGTGTTATTGGATGTGCATATTATCTTGTTGTTTTTCTTCTTCCTTATTATAGTTCTTTATTGAGGCTGAGGTTTAGGGTGAGA GAAATGTGTAACTGTATGATGAGAAATGAAGTTCCCACATGTTTGATGTTGTTTGAAACAAATTTGGGATAATAGTAAGTTCAATGAAAATATAAGTTTC AGGTGATCACTTATTCTCGTGGCACTAGAAATTGTGGTGGGGCTTTAGTTCAACTGACGTTGTAGAAATTAATCTTTTGGGATCACTATCTTCGTATAAT ATTTTTCTTGTTCTCCTTCAGTGTTCTTATTAGGCCACATCCTGCGATTTGGCGCTTGGTCCACGGGATGGCTGTTGTTTACCTGGTTGCCCTAACATTT TTGCTTTTCCAGAAACGTGATGATGCTCGGCAGTTTATGAAGTATCTTCATCCCGATCTTGGTGTTGAGCTTCCAGAAAGATCTTACGGTGCTGATTGCC GCATATATTTAGCTGATAACCCTACAAGCAGGTTTAAGAATGTTTATGAGACACTTTTTGATGAGTTTGTTCCAGCTCATATTATTGGGTGGTGGGGGAA GGCTATATTGATTCGTAATCAACCTCTTCTTTGGGTGTTATCAATTGGCTTTGAGATGATGGAGCTTACTTTTCGCCACATGTTACCAAATTTCAATGAG TGCTGGTGGGACAGTATTATTCTTGACATCTTGATCTGCAATTGGTTTGGTATCTGGGCAGGAATGCATACTGTTAGGTACTTCGATGGAAAAACATACA AGTGGGTTGGTCTAAGCCGCCAGCCGAATATAATAGGGAAAGTAAGTTTTAATGTTTATGATTGTTTTTTAGTGTCACATAATGTTGGAAGCTTTTTTTC TATTGAAATTGAAGTCACTCAGACCTGTATGATAGATATCTTTGTGTACTGGGTCCATAACCAATGCTTAATATATGATAATTGTCTTAACTAAAATTTT AGATAAGGAAATTGAACATGGTTCTTGTGTTCTTCCCAAAACTTTCGTTGTTATCAGGTGAAGCGAACATTAGGCCAATTCACACCAGCTCATTGGGACA AAGATGAATGGCATCCATTGCTTGGTCCATGGCGTTTTATTCAAGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_188824; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_398723
| Blastp | CDP-diacylglycerol--serine O-phosphatidyltransferase 1 from Oryza sativa with 88.75% of identity |
|---|---|
| Blastx | CDP-diacylglycerol--serine O-phosphatidyltransferase 1 from Oryza sativa with 89.47% of identity |
| Eggnog | Phosphatidylserine synthase(ENOG410XS7H) |
| Kegg | Link to kegg annotations (4326076) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452433.1) |
| Pfam | Phosphatidyl serine synthase (PF03034.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |