Ll_transcript_397094

• Id Trinity: TRINITY_DN51955_c1_g1_i14
• Name Transcript: Ll_transcript_397094
• Sequence: GTGAGTTTAACCGAACACAAAGCACAGAGCAACAACAACAATGGCATCGTCATTCGTCAAACTCGATGATTCTCCAATGTTCCAGAAGCAGTTATTTTCT CTTGAAGAAACGACTGACGAGTTAAAGGACCGGTGCCAGAAACTATTTAAAGGGTGTAAGAAGTTTATGACAGCTTTGGGGGAACAATATAATGGGGAAA TTTCCTTTGCTGATTCATTAGAAGCATTTGGCGGTGGCCAGGATGACCCTGTTAGTGTATCAATTGGAGGGCCGGTCATATCTAAGTTTATTACCACACT GCGTGAGCTAGCTAGTTTTAAAGAGCTTCTCCGTTCACAGGTAGAGCACGTGTTGATTGACCGGCTGGCGGAGTTTATGACTGTTGATTTGCAAGATGCA AAGGACTCTCGCCGCCGTTTTGACAAAGCTGTGAATTCTTATGATCAGTCACGAGAGAAGTTTGTGTCCTTGAAGAAAAATACCCCGGGAGACATTGTCG CTGAATTAGAAGAGGATCTACAAAATTCAAAGTCAGCATTTGAAAAAAGTCGCTTCAATCTAGTGAACTCGCTCATGAATATTGAAGTGAAAAAGAAGTA TGAGTTCTTGGAGTCCGTTAGTGCAATAATGGATGCTCATCTGAGATACTTTAAGTTGGGTTATGAGTTACTGAGCCAAATGGAGCCTTATATTCACCAG GTGCTAACATATGCTCAACAATCTAAAGAAATGGCTAATATCGAGCAAGATAAGCTTGCAAAACGAATCCAGGAATACCGAACCCAGGCCGAGCTGGAAA ATACACGAGCTTCTTGCAATACAGAACCCTTGCCAAATGCTGATGGCACCCATGTTGTAGGCTTGAACTCTTATAGAAGTTTTGAATCAGGGATGCAGCC TGAAACCAAGGGCGAGGTTCAAACAGTTAAACAGGGCTATCTGTTGAAACGATCATCAAGCTCGCGTGGAGATTGGAAACGGAGGTTCTTTGTACTTGAT AACCGAGGGAGTTTGTATTATTACAGAGTGAAAGGAGGCAAACCCATGGGCTCTCAGTCATATCATTATACTCGTTCTGGTGAACAAAACAGTGGCATGT TTGGTAGATTTCGTTCAAGGCACAACAGGGCAGCATCGCTAAATGAGGATATTTTGGGTTGCTGTACAGTTGATCTGTGCACATCCACTATAAAGATGGA TGCAGAGAATACAGATCTACGACTTTGCTTCCGTATTATTTCTCCCTCGAAGTCATATACACTGCAGGCTGAAAATGAAGCTGATAGGATGGACTGGGTA AACAAAATAACTGGAGCCATCACATCGCTTTTTAATTCTCAGTTTCTTCAGCCTCATTATGGTAGATTACATTTTGAAAATAAAAACTCAGCAGGTAGTG CTTCCTTGACTAGCCAATCAGAGGATAGTAATAGATCTTTGATGGATGACATATATTCCAAGGAAGTGGTTAGTGTCTCTAAGATTTTAAGGGGAATTCC TGGGAATGATAAATGTGCTGAATGCGGTGCTACTGAACCAGAATGGGCATCTTTAAATCTTGGCATATTGCTGTGCATTGAATGCTCTGGGGTGCATCGA AATCTTGGAGTTCATATCTCAAAGGTGAGATCTATAACGTTAGATGTCAAGGTTTGGGAACCTGCTGTTTTAGAGTTGTTTGATAACTTGGGTAATGCTT ATTGTAATTCTATTTGGGAGGGCTTGCTTCTACTGAATGATGAAAGGTAAAGTTGTGATTTCAATTACGCAATGTACACTAATGTGCTATATCTCACGTC GAGTAGTTGAGCTTGAAATCCATTCCTATTGTAAACAATTATCTACAGAGTAGTTGAATCAAATGCGCCTATGAAACCATGCTCCACAGATGCCTTCCAA TACAAAGAAAGGTACATCCAAGCAAAGGTAAGCAGATTAAGTTCAATTTCACATTTAATACTGTAATTACCACTAATGATTACAAAGCAATAACTAAGGT AGCAACTTCCTAGTTACATGAATGATATTTCCTATGTACATGAATGTACTATTACATGAACATGAATTATTGCACTTGATTATACAAGAACCAAGGCATT GGCTCAGTGGCTCCTTCTATGTCAGTAAATTAATTATTTCCATCACTACTTACTATCATTTCTCTCTTCTTTCTCATCATTCTTGTAATCTAAAATATGT TATGTGTGCTGTATTTTCTGAGAAGGAGGTCTCTGCTTTCTTCACGATTTTTACTGTGATTTAATTATAACTGTGCCCATCTCCACTTTCATACTTTCTC AGCTTTCTTGAAATCTAAAATATGTTTTGTATTGTTAGAAACCTCTGCTTTCTTCACAGTTTTTACTGTGGCTATGTATCATTTTAAATTCGAAAATGTG TTTTTCTTGATCAGTATGTAGAGAAATCATTAATCTTCAGAGAAGAGGATATACCCGGGAATCCTTCACTTTCCATAAGGATCTGGCAAGCAGTTCAGAC TATCAATGTAAAAGAAGTGTACCGCCTTATAGTTACATCAAATTCAAATCTGATAAACATGACATACGATGACGTGGTTCACCATGCTGATGGTGAAGAT TTGAACTTAGGATCTCTAAATGAACATCAGCATGATCCTGAAGCCTGTCTGAGAGTTAAGGATACTAATGAGACCGAGAGCTGTTTCCTTGGCTGGTCAT TATTACATCTGGCATGTCATTCTGGCAGTCCACTAATGGTTGAGTTGTTGCTCCAATTTGGTGCTGATATAAACATGTGTGACTATCATGGA
• Tissue: pods
• Gene name: LI_gene_188870;
• Additional information: details;

Expression of Ll_transcript_397094

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.2
• PS2: 0.3
• PS3: 0.6
• PW1: 0
• PW2: 0.7
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397094

• Blastp: ADP-ribosylation factor GTPase-activating protein AGD2 from Arabidopsis with 68.37% of identity
• Blastx: ADP-ribosylation factor GTPase-activating protein AGD4 from Arabidopsis with 61.93% of identity
• Eggnog: domain, ankyrin repeat and PH domain(COG5347)
• Kegg: Link to kegg annotations (AT1G60860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413717.1)
• Pfam: BAR domain of APPL family (PF16746.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;