Ll_transcript_397089

• Id Trinity: TRINITY_DN51955_c1_g1_i9
• Name Transcript: Ll_transcript_397089
• Sequence: GTGAGTTTAACCGAACACAAAGCACAGAGCAACAACAACAATGGCATCGTCATTCGTCAAACTCGATGATTCTCCAATGTTCCAGAAGCAGTTATTTTCT CTTGAAGAAACGACTGACGAGTTAAAGGACCGGTGCCAGAAACTATTTAAAGGGTGTAAGAAGTTTATGACAGCTTTGGGGGAACAATATAATGGGGAAA TTTCCTTTGCTGATTCATTAGAAGCATTTGGCGGTGGCCAGGATGACCCTGTTAGTGTATCAATTGGAGGGCCGGTCATATCTAAGTTTATTACCACACT GCGTGAGCTAGCTAGTTTTAAAGAGCTTCTCCGTTCACAGGTAGAGCACGTGTTGATTGACCGGCTGGCGGAGTTTATGACTGTTGATTTGCAAGATGCA AAGGACTCTCGCCGCCGTTTTGACAAAGCTGTGAATTCTTATGATCAGTCACGAGAGAAGTTTGTGTCCTTGAAGAAAAATACCCCGGGAGACATTGTCG CTGAATTAGAAGAGGATCTACAAAATTCAAAGTCAGCATTTGAAAAAAGTCGCTTCAATCTAGTGAACTCGCTCATGAATATTGAAGTGAAAAAGAAGTA TGAGTTCTTGGAGTCCGTTAGTGCAATAATGGATGCTCATCTGAGATACTTTAAGTTGGGTTATGAGTTACTGAGCCAAATGGAGCCTTATATTCACCAG GTGCTAACATATGCTCAACAATCTAAAGAAATGGCTAATATCGAGCAAGATAAGCTTGCAAAACGAATCCAGGAATACCGAACCCAGGCCGAGCTGGAAA ATACACGAGCTTCTTGCAATACAGAACCCTTGCCAAATGCTGATGGCACCCATGTTGTAGGCTTGAACTCTTATAGAAGTTTTGAATCAGGGATGCAGCC TGAAACCAAGGGCGAGGTTCAAACAGTTAAACAGGGCTATCTGTTGAAACGATCATCAAGCTCGCGTGGAGATTGGAAACGGAGGTTCTTTGTACTTGAT AACCGAGGGAGTTTGTATTATTACAGAGTGAAAGGAGGCAAACCCATGGGCTCTCAGTCATATCATTATACTCGTTCTGGTGAACAAAACAGTGGCATGT TTGGTAGATTTCGTTCAAGGCACAACAGGGCAGCATCGCTAAATGAGGATATTTTGGGTTGCTGTACAGTTGATCTGTGCACATCCACTATAAAGATGGA TGCAGAGAATACAGATCTACGACTTTGCTTCCGTATTATTTCTCCCTCGAAGTCATATACACTGCAGGCTGAAAATGAAGCTGATAGGATGGACTGGGTA AACAAAATAACTGGAGCCATCACATCGCTTTTTAATTCTCAGTTTCTTCAGCCTCATTATGGTAGATTACATTTTGAAAATAAAAACTCAGCAGGTAGTG CTTCCTTGACTAGCCAATCAGAGGATAGTAATAGATCTTTGATGGATGACATATATTCCAAGGAAGTGGTTAGTGTCTCTAAGATTTTAAGGGGAATTCC TGGGAATGATAAATGTGCTGAATGCGGTGCTACTGAACCAGAATGGGCATCTTTAAATCTTGGCATATTGCTGTGCATTGAATGCTCTGGGGTGCATCGA AATCTTGGAGTTCATATCTCAAAGGTGAGATCTATAACGTTAGATGTCAAGGTTTGGGAACCTGCTGTTTTAGAGTTGTTTGATAACTTGGGTAATGCTT ATTGTAATTCTATTTGGGAGGGCTTGCTTCTACTGAATGATGAAAGAGTAGTTGAATCAAATGCGCCTATGAAACCATGCTCCACAGATGCCTTCCAATA CAAAGAAAGGTACATCCAAGCAAAGTATGTAGAGAAATCATTAATCTTCAGAGAAGAGGATATACCCGGGAATCCTTCACTTTCCATAAGGATCTGGCAA GCAGTTCAGACTATCAATGTAAAAGAAGTGTACCGCCTTATAGTTACATCAAATTCAAATCTGATAAACA
• Tissue: pods
• Gene name: LI_gene_188870;
• Additional information: details;

Expression of Ll_transcript_397089

FPKM

• PAB: 0.2
• PNAB: 7.9
• PS1: 6.5
• PS2: 3
• PS3: 4.8
• PW1: 5
• PW2: 4.8
• PW3: 2.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397089

• Blastp: ADP-ribosylation factor GTPase-activating protein AGD2 from Arabidopsis with 64.82% of identity
• Blastx: ADP-ribosylation factor GTPase-activating protein AGD2 from Arabidopsis with 64.82% of identity
• Eggnog: domain, ankyrin repeat and PH domain(COG5347)
• Kegg: Link to kegg annotations (AT1G60860)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413717.1)
• Pfam: BAR domain of APPL family (PF16746.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;