Ll_transcript_399686

• Id Trinity: TRINITY_DN51962_c1_g1_i19
• Name Transcript: Ll_transcript_399686
• Sequence: GTTGATTAAGTCCTACTACTACCAAAAGAAAGAGTAATCAGAAATAAATACTCCTACGAGTTAGATATAAACAGAACAAGTTCAGCGATATTACTATTCT CTATCACTTTTGCATTTTCCTTTGAATCACACAACACGAAAATTATGGACAAAGCCATTAACAGACAAAAGGTTCTTCTTCAACATCTCAACCCTTCATC ATCCATCTACGCTAACGAATCATCATCCCTCTCTGCTTCAGCATGTCTGGCGGGGGATAGCGCTGCTTATCACAGGACATCTGCATTTGGAGATGATGTA GTGATTGTGGCAGCATATCGGACTCCTCTTTGCAAAGCGAAACGTGGTGGTTTCAAAGACACGCACGCTGATGATCTGCTAGCCCCAGTTTTGAAGGCTG TAATAGAGAAAACCAACTTGAACCCAAGTGAAGTTGGTGACATTATTGTGGGTACTGTATTGGCACCTGGATCTCAAAGAGCTACTGAATGTCGAATGGC TGCATTCTATGCTGGTTTTCCTGATACTGTGCCTATTAGGACAGTTAATAGGCAATGTTCTTCTGGGCTCCAGGCTGTTGCCGATGTAGCTGCAGCTATA AAGGCTGGATTCTATGACATTGGAATTGGTGCTGGTTTGGAATCAATGACAGCTACCCCAATGGGATGGGAAGGATCGGTCAATCCCAAGGCAAAACTGT TTGAACAAGCTCAGAATTGCCTTCTTCCAATGGGGATTACGTCTGAAAATGTTGCACAACGCTTTGGAGTGTCAAGACAGGAACAAGATCAGGCTGCTGT TGAGTCTCATAGGCGTGCTGCTGCAGCTACTGCTGCTGGTAGATTTAAAGATGAAATTGTCCCAGTTACCACTAAGATCGTGGACCCAAAAACTGGCGAG GAGAAATCTGTCACCATTTCTGTTGATGATGGAATTCGACCTAATGCATCAGTGGCTGATCTAGGGAAGCTCAAACCTGTGTTCAAGAGAGATGGAACCA CCACTGCAGGTAATTCTAGCCAGGTTACTGATGGTGCTGGAGCAGTTCTGCTGATGAAAAGAAGTGTTGCAGTTCAAAAGGGGCTACCCATCCTTGGCGT ATTCAGGACTTTCGCCGCAGTTGGTGTTGATCCTGCTATCATGGGTGTTGGTCCTGCTGCTGCAATTCCAGCTGCTGTCAAGGCTGCAGGCCTAGAGCTC GATGACATTGACCTTTTTGAAATTAATGAGGCATTTGCTTCCCAGTTTGTATATTGCCGTAACAAGCTCGGACTTGATCCAGAAAAGGTCAATGTTAATG GAGGTGCAATGGCCATTGGCCATCCTTTGGGTGCAACAGGGGCTCGATGTGTTGCAACACTACTGCACGAGATGAAGCGACGGGGAAAGGACTCTCGATT TGGAGTGATATCTATGTGCATAGGTACTGGAATGGGTGCAGCTGCTGTTTTCGAGAGAGGAGATAGCGTTGACGAACTTCGCAATGCTCGGAAAACGGAA GGCAACCGTTTCTTATCTAAGGATGCTAAGTAAAATTAGTTATAACTAATCATGATTTGATTTCGTCATCAACCATGACGTCTTAAATAAAGTGTGTCCT ATGACAGTAAAAATGTCTAAAAGTCAATAATACAATCCTTTGTATTCATTATAAGACTTGCATTAGTTTGAGTTATTCTTATTTTGACCATATCATTGAA GCCTGTGTTTGGATAGAAATATTGTACCAAAAGGGATTAATGCAATGCCATTTGGTATTTCTCAGCATATGATTTGTTGGGTCCTCATGTACTAAGTTCT ATATTGGTAGCATGCAAAAATAAACCGGAATAGAAAGAATAAAAGATTTGAGTGAAGTTTGACACTAAGGTATACATAAATGTTGTGTTTGGCTAAAAAA TTATTGTATTGTTTCAACTTTCAAGTATTTCCTAAGTTTAGTATCTCTACACTAAAAGAAAAGACTAGTTTGCAAAATGAAGTTCTAAGATTTCAAGGCT TTGCTTCTGTTCAATATATAATGACTGAGGCTAACTTTGGTTGGTTAATCCGATCAGTTCATCGATGGTCGGCAAGTATGATGGTCTTAATGATGATCCT GCACGTATTTCGAGTGTATCTCACTGGAGGTTTTAAAAAACCTCGCGAATTGACTTGGGTTACGGGTGTTGTTTTGGCTGTATTGACCGCATCTTTTGGT GTAACTGGTTATTCCTTACCTTGGGACCAAATTGGGTATTGGGCAGTAAAAATTGTAACGGGTGTACCAGAAGCTATTCCTGTAATAGGATCGTCTGTAG TGGAGTTATTACGCGGAAGTGCTAGTGTGGGACAATCTACCTTGACTCGTTTTTATAGTTTACATACTTTTGTATTACCTCTTCTTACTGCCGTATTTAT GTTAATGCACTTTCTAATGATACGTAAGCAAGGCATTTCCGGTCCTTTATAGAGAGTATAGTCTGGATCGTAGATATTTGTAATCGAGCATCTTTCATTT GGGGGAGGAACAATAGTATTTCACTGCTACAAATATGTCTTATTTAAAAGAATAAGACATATATTTGGATATTTCCCTTCAACTATTCATGTATGTCAAA TAAAATAGAAAAAAAATAATCTAATTTTGTTAAGTTGAAGGGAATTCTCCGAAGAAACAATGGATTATGGGAGTAACAAAAAAACCTGACTTGAGTGATC CTGTATTAAGAGCTAAATTGGCTAAAGGAATGGGTCATAATTATTATGGAGAACCCGCATGGCCAAACGATCTTTTATATATTTTTCCAGTAGTCATTCT AGGTACTATTGCCTGTAACGTAGGTTTAGCCGTTCTAGAACCATCAATGATTGGGGAACCCGCCGATCCATTTGCAACTCCTTTGGAAATATTGCCTGAA TGGTATTTCTTTCCCGTATTTCAAATACTCCGTACAGTGCCAAATAAGTTATTGGGCGTTCTTTTAATGGTTTTGGTACCTACGGGATTATTAACAGTAC CCTTTTTGGAGAATGTTAATAAATTTCAAAACCCGTTTCGCCGTCCAGTAGCCACAACCGTCTTTTTGATTGGTACCGCAGTGGCCTTGTGGTTGGGTAT TGGAGCAACATTACCTATTGAGAAATCCCTAACTTTAGGTCTTTTTTAAATTGATTCAATTATGAAATAAAAAAAAATATCATGCCATGTGATTGTGA
• Tissue: pods
• Gene name: LI_gene_188924;
• Additional information: details;

Expression of Ll_transcript_399686

FPKM

• PAB: 175.7
• PNAB: 13.6
• PS1: 16.2
• PS2: 10.5
• PS3: 15.5
• PW1: 12.8
• PW2: 12.6
• PW3: 23.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399686

• Blastp: 3-ketoacyl-CoA thiolase 2, peroxisomal from Arabidopsis with 85.93% of identity
• Blastx: 3-ketoacyl-CoA thiolase 2, peroxisomal from Arabidopsis with 85.93% of identity
• Eggnog: acetyl-coa acetyltransferase(COG0183)
• Kegg: Link to kegg annotations (AT2G33150)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432803.1)
• Pfam: Thiolase, N-terminal domain (PF00108.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;