Ll_transcript_399893

• Id Trinity: TRINITY_DN51967_c0_g1_i10
• Name Transcript: Ll_transcript_399893
• Sequence: CTAAACCATTTGATTTCCAATAAATTGATGGTTAAGATGATGAGTAAGTCTAAAAAGACTTACAAGTTTGACAACAGAAATGTTTCCCTTGCCTTGTCAG CGCCGAAAGGATTGTTTCCTCCAGAACCTGAACATTATCGAGGGCCTAAGCTGAAGGTTGCAATTATAGGAGCTGGGCTTGCGGGCATGTCAACTGCGGT GGAACTCTTGGATCAAGGGCATGAGGTGGATATATATGAGTCGAGGTCTATAATAGGTGGGAAAGTTGGTTCTTTTGTTGATAAACAAGGTAATCACATT GAAATGGGACTGCATGTTTTCTTTGGTTGCTACAACAATCTTTTCCGATTGATGAAAAAGGTGGGTGCTCATAACAATTTACTTGTGAAGGATCACACTC ACACTTTTGTGAACAAAGGGGGTGAAATTGGAGAACTTGATTTCCGCTTCTTGGTTGGGGCACCATTACATGGGATAAAGGCATTTTTGACCACAAATCA GCTTAAGACTTATGATAAGGCTAGAAATGCAGTGGCTCTTGCACTGAGTCCAGTCGTCAGAGCTCTTGTTGATCCAGATGGTGCATTAAGGGACATAAGG AATTTAGACAGTGTAAGAGGATACACTATTTTCTTGTTATTTGTGGTCCCTTTCCAAATAATGTTCCTGATTATCTGTTCCAGCTTTATATTTGGGCCTT CCATCTGTTCCAGACTAGACATATGTGCAGGCTCATACACACATGCACGCACATACATATACTATCAACGAGTAAATAGGAAGGAACTTCAATGCTACAC TTTCTACAAACTGTGTTTTTCAATCATCTTTTCTTTTGACCATTTCACACTTTCCTTACAGATTAGTTTCTCAGACTGGTTTTTATCCAAAGGTGGTACA CGCCCGAGTATTAAAAGAATGTGGGATCCAGTTGCTTATGCCCTTGGGTTTATTGACTGTGATAATATCAGCGCCCGTTGCATGCTCACCATATTTGCAT TGTTTGCCACAAAGACCGAGGCTTCTCTTTTGCGAATGCTGAAGGGTTCACCAGATGTTTATTTGAGTGGCCCTATCCGGAAGTACATCACGGATAGAGG GGGCAGGTTCCATCTTAGATGGGGATGCAGAGAAATACTTTATGGTAACTCCGCTGATGGGAGTACTTATGTCACAGGACTTTCCATGTCACAGGCTACT GACAAGAAAATTGTGAAAGCTGATGCTTATGTTGCTGCAATAGATATCCCTGGAATAAAAAAGTTACTTCCATCGGAGTGGAGGCAACATCAGTTTTTCG ATAACATATATGAACTAGTTGGAGTTCCTGTTGTTACAGTGCAACTCAGATACAACGGTTGGGTTACAGAGTTGCAGGATCTAGAAATGTCAAGGCAACT GAGGAAAGCTATTGGGTTAGACAACCTTCTCTATACCCCCGATGCAGATTTTTCTTGCTTTGCAGACCTTGCACTTACATCTCCTGAAGATTATTACATC GAGGGACAAGGATCATTGCTCCAATGTGTTCTGACACCTGGTGATCCATACATGCCCTTACCAAATGATGAAATTGTTGGAAGGGTAGCAAAACAGGTTT TATCATTGTTCCCATCAGCTCAAGGTTTAGAAGTGACTTGGTCATCTGTTGTTAAAATTGGACAATCTTTGTACCGCGAGGGACCCGGTAAAGACCCATT TAGACCTGATCAAAAGACACCAGTGAAAAATTTCTTTCTTTCTGGCTCTTACACAAAGCAGGACTACATAGACAGCATGGAAGGTGCAACCTTATCCGGC AGGCAAGCGTCGGCCTATATCTGTGATGCGGGGGAAGAGCTCGTGGCATTGCGGAAGGAGCTTGATGCTGAGTTTAAAGATGACCTTAAATTTTCAAATA CTAATGATGAATTAAGTCTAGTATGAGATAATTTTGAAATTAAGTAGCTACATTAGCTTATAGTTTGTTCCATATACATGTAACATTTTATAATGTATAT TCAATCCAAAAATGATTAAAAATTTAAGAACTTTTGGTCTCAGAGCAAGCGCTGCAATTTATAGTTGTAAAATCTGGTATCCTATAAATTGTGGTTCCTA TACAGCATGTGACATTCTTAGCCCAA
• Tissue: pods
• Gene name: LI_gene_188973;
• Additional information: details;

Expression of Ll_transcript_399893

FPKM

• PAB: 36.6
• PNAB: 6
• PS1: 8.6
• PS2: 5.4
• PS3: 11.8
• PW1: 5.7
• PW2: 9.6
• PW3: 10.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399893

• Blastp: Zeta-carotene desaturase, chloroplastic/chromoplastic from Tagetes with 84.51% of identity
• Blastx: Zeta-carotene desaturase, chloroplastic/chromoplastic from Tagetes with 84.51% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439955.1)
• Pfam: NAD(P)-binding Rossmann-like domain (PF13450.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;