Ll_transcript_399903

• Id Trinity: TRINITY_DN51967_c0_g1_i18
• Name Transcript: Ll_transcript_399903
• Sequence: CTGAACTAACTAGGAAACAAAGTTGGCAACACCTTTCACTTCAATGGTAGCTATTCATTTTACCATTTATGCTCTTTCTTAATACACATAATCATATAAT AACACATAACTCAAAAGTTCTCCCACTATTCTTTCCAACAACATAGTTGGTTCTGGTTTTCTCTCTGACTATGATGGCTTCTCTGATTCATTGTCCGGTA ACTTCTCTGTCCGTAACTCCAGGAAGAGATTCTGTTAGATTCTTTGTCCCAACTAGAACTAACCGTTTCACTAAGAACTTTAACTACCGGATTCGTTGCT CTTTGGACTCTAATGTTTCTGACATGAGAACTAATGCGCCGAAAGGATTGTTTCCTCCAGAACCTGAACATTATCGAGGGCCTAAGCTGAAGGTTGCAAT TATAGGAGCTGGGCTTGCGGGCATGTCAACTGCGGTGGAACTCTTGGATCAAGGGCATGAGGTTGATATATATGAGTCAAGGTCTTTCATTGGTGGGAAA GTTGGTTCCTTTGTTGATAAACAAGGAAATCACATTGAAATGGGACTGCATGTTTTCTTTGGTTGCTACAACAATCTTTTCCGATTGATGAAAAAGGTGG GTGCCAATAACAATCTACTTGTGAAGGATCACACTCACACTTTTGTAAACAAAGGGGGTCAAGTTGGAGAACTTGATTTTCGCTTCCTGGTCGGGGCACC ATTACATGGGATAAGGGCATTCTTGACCACAAATCAGCTTAAGACTTATGATAAGGCCAGAAATGCTTTGGCTCTTGCACTGAGTCCTGTCGTCAGAGCT CTTGTTGATCCAGATGGTGCATTACAGGACATTAGGAATTTAGATGGTGTTAGCTTTTCAGACTGGTTTTTATCCAAAGGTGGTACACGTGCGAGTATTC AAAGAATGTGGGATCCAGTTGCCTATGCCCTTGGGTTTATTGACTGTGATAATATCAGCGCCCGTTGCATGCTCACTATATTTGCATTGTTTGCCACAAA GACTGAGGCTTCTCTTTTGAGAATGCTGAAGGGTTCACCAGATGTTTATTTGAGTGGCCCTATCCGGAAGTACATCACAGATAGAGGGGGGAGGTTCCAT CTTAGGTGGGGATGCAGAGAAATACTTTACGGTAACTCAGCTGATGGGAGTACTTTTGTTACAGGACTTTCCATGTCAAAGGCCACTGATAAAAAAATTG TGAAAGCTGATGCATATGTTGCTGCCTGCGATGTCCCTGGAATTAAAAGATTACTTCCATCAGAGTGGAGGCAACATCAGTTTTTTAATAACATATATGA ACTAGTTGGAGTTCCTGTTATTACAGTGCAACTCAGATACAATGGTTGGGTTACAGAGTTGCAGGATCTAGAAAAGTCAAGG
• Tissue: pods
• Gene name: LI_gene_188973;
• Additional information: details;

Expression of Ll_transcript_399903

FPKM

• PAB: 61.5
• PNAB: 8.7
• PS1: 14.9
• PS2: 7.8
• PS3: 17.1
• PW1: 8.7
• PW2: 15.8
• PW3: 18.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399903

• Blastp: Zeta-carotene desaturase, chloroplastic/chromoplastic from Lycopersicon with 80.84% of identity
• Blastx: Zeta-carotene desaturase, chloroplastic/chromoplastic from Capsicum with 80.84% of identity
• Eggnog: Desaturase(COG3349)
• Kegg: Link to kegg annotations (543629)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439955.1)
• Pfam: NAD(P)-binding Rossmann-like domain (PF13450.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;