Ll_transcript_399887

• Id Trinity: TRINITY_DN51967_c0_g1_i5
• Name Transcript: Ll_transcript_399887
• Sequence: CTAAACCATTTGATTTCCAATAAATTGATGGTTAAGATGATGAGTAAGTCTAAAAAGACTTACAAGTTTGACAACAGAAATGTTTCCCTTGCCTTGTCAG CGCCGAAAGGATTGTTTCCTCCAGAACCTGAACATTATCGAGGGCCTAAGCTGAAGGTTGCAATTATAGGAGCTGGGCTTGCGGGCATGTCAACTGCGGT GGAACTCTTGGATCAAGGGCATGAGGTGGATATATATGAGTCGAGGTCTATAATAGGTGGGAAAGTTGGTTCTTTTGTTGATAAACAAGGTAATCACATT GAAATGGGACTGCATGTTTTCTTTGGTTGCTACAACAATCTTTTCCGATTGATGAAAAAGGTGGGTGCTCATAACAATTTACTTGTGAAGGATCACACTC ACACTTTTGTGAACAAAGGGGGTGAAATTGGAGAACTTGATTTCCGCTTCTTGGTTGGGGCACCATTACATGGGATAAAGGCATTTTTGACCACAAATCA GCTTAAGACTTATGATAAGGCTAGAAATGCAGTGGCTCTTGCACTGAGTCCAGTCGTCAGAGCTCTTGTTGATCCAGATGGTGCATTAAGGGACATAAGG AATTTAGACAGTATTAGTTTCTCAGACTGGTTTTTATCCAAAGGTGGTACACGCCCGAGTATTAAAAGAATGTGGGATCCAGTTGCTTATGCCCTTGGGT TTATTGACTGTGATAATATCAGCGCCCGTTGCATGCTCACCATATTTGCATTGTTTGCCACAAAGACCGAGGCTTCTCTTTTGCGAATGCTGAAGGGTTC ACCAGATGTTTATTTGAGTGGCCCTATCCGGAAGTACATCACGGATAGAGGGGGCAGGTTCCATCTTAGATGGGGATGCAGAGAAATACTTTATGGTAAC TCCGCTGATGGGAGTACTTATGTCACAGGACTTTCCATGTCACAGGCTACTGACAAGAAAATTGTGAAAGCTGATGCTTATGTTGCTGCAATAGATATCC CTGGAATAAAAAAGTTACTTCCATCGGAGTGGAGGCAACATCAGTTTTTCGATAACATATATGAACTAGTTGGAGTTCCTGTTGTTACAGTGCAACTCAG ATACAACGGTTGGGTTACAGAGTTGCAGGATCTAGAAATGTCAAGGTAATCTGCATTTTAGGGTCCATATAGAAACCATAATGTTAAATAATTTTGTTTT AAGAATTTGGAATGATGTATTTTCCTTCAATCGTTATTGCTGAACTTTATTATGAATCCTTACTTTCTGGATGGCAGGCAACTGAGGAAAGCTATTGGGT TAGACAACCTTCTCTATACCCCCGATGCAGATTTTTCTTGCTTTGCAGACCTTGCACTTACATCTCCTGAAGATTATTACATCGAGGGACAAGGATCATT GCTCCAGTAAGTGCATGTGTTTAAGGAAGAGATGATTTGTTTTTACATAAAATCTTGTGTGGCTAAGTATGTTATGGAAGAGATGAATCTGCATCATCTA TCTATCATGCAACTTGTATCTGATATTGCTAAACGCATCTGGTTTACTGGTTCATCCTTCTCATAACAAGTCTAACTTCCCATGGAATTAAAATTTTGTC AGCAGAATTCATATTATCTTCGATTTTATCTTGACCTTCAAAGTACATAATGTTATTTCATCTTTCAGATGTGTTCTGACACCTGGTGATCCATACATGC CCTTACCAAATGATGAAATTGTTGGAAGGGTAGCAAAACAGGTTTTATCATTGTTCCCATCAGCTCAAGGTTTAGAAGTGACTTGGTCATCTGTTGTTAA AATTGGACAATCTTTGTACCGCGAGGGACCCGGTAAAGACCCATTTAGACCTGATCAAAAGACACCAGTGAAAAATTTCTTTCTTTCTGGCTCTTACACA AAGCAGGACTACATAGACAGCATGGAAGGTGCAACCTTATCCGGCAGGCAAGCGTCGGCCTATATCTGTGATGCGGGGGAAGAGCTCGTGGCATTGCGGA AGGAGCTTGATGCTGAGTTTAAAGATGACCTTAAATTTTCAAATACTAATGATGAATTAAGTCTAGTATGAGATAATTTTGAAATTAAGTAGCTACATTA GCTTATAGTTTGTTCCATATACATGTAACATTTTATAATGTATATTCAATCCAAAAATGATTAAAAATTTAAGAACTTTTGGTCTCAGAGCAAGCGCTGC AATTTATAGTTGTAAAATCTGGTATCCTATAAATTGTGGTTCCTATACAGCATGTGACATTCTTAGCCCAA
• Tissue: pods
• Gene name: LI_gene_188973;
• Additional information: details;

Expression of Ll_transcript_399887

FPKM

• PAB: 2
• PNAB: 0
• PS1: 0.4
• PS2: 0
• PS3: 0.1
• PW1: 0.3
• PW2: 0.2
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399887

• Blastp: Zeta-carotene desaturase, chloroplastic/chromoplastic from Tagetes with 86.35% of identity
• Blastx: Zeta-carotene desaturase, chloroplastic/chromoplastic from Tagetes with 78.48% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428565.1)
• Pfam: NAD(P)-binding Rossmann-like domain (PF13450.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;