Ll_transcript_399889

• Id Trinity: TRINITY_DN51967_c0_g1_i7
• Name Transcript: Ll_transcript_399889
• Sequence: CTAAACCATTTGATTTCCAATAAATTGATGGTTAAGATGATGAGTAAGTCTAAAAAGACTTACAAGTTTGACAACAGAAATGTTTCCCTTGCCTTGTCAG CGCCGAAAGGATTGTTTCCTCCAGAACCTGAACATTATCGAGGGCCTAAGCTGAAGGTTGCAATTATAGGAGCTGGGCTTGCGGGCATGTCAACTGCGGT GGAACTCTTGGATCAAGGGCATGAGGTGGATATATATGAGTCGAGGTCTATAATAGGTGGGAAAGTTGGTTCTTTTGTTGATAAACAAGGTAATCACATT GAAATGGGACTGCATGTTTTCTTTGGTTGCTACAACAATCTTTTCCGATTGATGAAAAAGGTGGGTGCTCATAACAATTTACTTGTGAAGGATCACACTC ACACTTTTGTGAACAAAGGGGGTGAAATTGGAGAACTTGATTTCCGCTTCTTGGTTGGGGCACCATTACATGGGATAAAGGCATTTTTGACCACAAATCA GCTTAAGACTTATGATAAGGCTAGAAATGCAGTGGCTCTTGCACTGAGTCCAGTCGTCAGAGCTCTTGTTGATCCAGATGGTGCATTAAGGGACATAAGG AATTTAGACAGTATTAGTTTCTCAGACTGGTTTTTATCCAAAGGTGGTACACGCCCGAGTATTAAAAGAATGTGGGATCCAGTTGCTTATGCCCTTGGGT TTATTGACTGTGATAATATCAGCGCCCGTTGCATGCTCACCATATTTGCATTGTTTGCCACAAAGACCGAGGCTTCTCTTTTGCGAATGCTGAAGGGTTC ACCAGATGTTTATTTGAGTGGCCCTATCCGGAAGTACATCACGGATAGAGGGGGCAGGTTCCATCTTAGATGGGGATGCAGAGAAATACTTTATGGTAAC TCCGCTGATGGGAGTACTTATGTCACAGGACTTTCCATGTCACAGGCTACTGACAAGAAAATTGTGAAAGCTGATGCTTATGTTGCTGCAATAGATATCC CTGGAATAAAAAAGTTACTTCCATCGGAGTGGAGGCAACATCAGTTTTTCGATAACATATATGAACTAGTTGGAGTTCCTGTTGTTACAGTGCAACTCAG ATACAACGGTTGGGTTACAGAGTTGCAGGATCTAGAAAAGTCAAGGCAACTGAGGAGAGCTGTTGGGTTAGATAACCTTCTCTATACTCCAGATGCAGAT TTTTCTTGTTTTGCAGACCTTGCACTCACATCTCCTGAAGATTATTACATCGAGGGACAAGGATCATTGCTCCAATGTGTTCTGACTCCAGGTGATCCAT ACATGCCCTTACCAAATGATGAAATTATTTCAAGGGTGGCAAAACAGGTGTTATCACTATTTCCATCAGCTCAAGGTTTAGAAGTGACTTGGTCATCTGT TGTTAAAATTGGACAATCTCTGTACCTTGAGGGACCTGGTAAAGATCCATTTAGACCTGACCAAAAGACGCCAGTGAAGAATTTCTTTCTTTCTGGCTCT TACACAAAGCAGGTAAACTTTGAATGCTCTGCACCTTATTGACTAACCTTATAATTGAGCTTATCTTATGCATAAATGATGTAATCCTCAAAATTGCACG CCATTAAGATTTAATTTAGCTGAAATGCACCAGATCTTACAGTGGAGTCAGTTAAATCTCTAAATTCCCTTATTCCTGCCTCCTGGGCTTCGAGTATGAA CCATGAAAAAGAGTTTAGAAAGTGAGGTTTCTACTGCTATTCAAACAATAAATACCTGGTTGCTGCTATACTTGATTGAACGAGATGAATCGCTGAGCGG TTTCGACATCTGCTGTGAAATACCACATATTAATGTTTTCTCGTCACTCATTTAGTCTATGATTCAGGAGCACAAAATTTCCTAGTGTGTTTAAAGTATT AGATGTAAGGTGCTTAGCATAGTTTCTGGTCTGTGGAAATTATAGGAGGATAAGATAAACAAATATGCACTTTTTTTTTATCGTAACATTAGTGGTATCA TGTACTTTTTACTATGCTTGCCTACTTCACAATCAAACTTAACTGGTCTTCCACTTCCTACTGAATGGGATACATACAAATTACTCAAATTTAACAATCG GTTTTAACCTTTCCCTTCGAGTCTCTGTTCAACTTTTTATCGATTGACTGCTCACGTTCTCTACTCAATTCAAGTATTTTAATGAACTCTTGAATTTTTT GCTGTCTGTAATTGCATTATGCTTTTGTGATACCTATGTTTCACTGATATTGCTGACTTTATCAATTTAATCGGTTCAGGACTACATAGACAGCATGGAA GGTGCAACATTGTCTGGCAGGCAAGCATCGGCCTATATCTGTGATTCCGGGGAAGAGCTGGTGGCATTGCGGAACATGCTTGATGCTGATTTTAAAGATG ACCTTAAAGTTGCAAATACCAAAGATGAATTAAGTGTAGTGTGAGAGAATTTTGCATATAAAGCAGCCACATTGGCTTACAGTAATCTTGTTTGGTGTAC GTATAACATTTTACAATGTATTTTCAAAATATAAATAATTGATAATTACGGAACTTTTAGTCTGGTAGCAAGTAATGTAATTTTAGTTGTGAAATCTGGT ATCCTATAAATTGTGGTTCCTATACAGCATGTGACATTCTTAGCCCAA
• Tissue: pods
• Gene name: LI_gene_188973;
• Additional information: details;

Expression of Ll_transcript_399889

FPKM

• PAB: 2.8
• PNAB: 2.4
• PS1: 2.1
• PS2: 2.9
• PS3: 2.8
• PW1: 2.8
• PW2: 3.4
• PW3: 2.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399889

• Blastp: Zeta-carotene desaturase, chloroplastic/chromoplastic from Tagetes with 87.94% of identity
• Blastx: Zeta-carotene desaturase, chloroplastic/chromoplastic from Tagetes with 87.94% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428565.1)
• Pfam: NAD(P)-binding Rossmann-like domain (PF13450.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;