Ll_transcript_398860

• Id Trinity: TRINITY_DN51971_c2_g4_i3
• Name Transcript: Ll_transcript_398860
• Sequence: GTGATATTTCTCGTACCTTCCCCTCACATGTATTCTTCCGACAAAGACATGGACCTGGCCAGCGGTCACTCTACAATGTTCTCAAGGCTTACTCAGTCTT TGACAGAAATGTCGGATATGTCCAGGGAATGGGGTTTTTAGCAGGTCTGTTGCTTCTTTATATGAGTGAGGAGGATGCATTTTGGTTGTTGGTTGCATTG CTTAAAGGAGCTGTTCATGCCCCAATGGAGGGCTTGTACCTGGCAGGATTGCCTCTAGTACAGCAATATCTCTCTCAATTTGAACAACTGGTAAAGGAGC ATCTACCGAAATTGGGAGAACATTTTTCACAAGAAATGATAAATCCTAGCATGTATGCAAGCCAGTGGTTCATAACTGTATTTTCATACTCCTTTCCATT CCATTTAGCTCTTCGGATTTGGGATGTCTTTCTTTACGAGGGTGTTAAAATTGTCTTTAAAGTTGGGTTGGCCCTATTAATGTATTGTCATGATGACTTG ATCAAACTCCCATTCGAGAAACTTTTACATGCCTTAAAAAAATTCCCCGAGGATGCAATGAATCCAGATACGATATTGCCTCTGGCATATTCAATTAAGG TACTCTTCCTTTCCACGCACTTTGGTAGTGATACGGCAAGATGTTTTCACATATTATAACAGGTATTGTAAAAATTTTGGTCAGCCTGAGCCCGCCCAAT ATATAGGTGGATTTGAATGCACTCGGCCACCTTGGGCGGGCTATGGTGAACTAACTTGCACCTTCGTTTCGCTTGCTCCTCGCTTTGTTGGGGATATTTA CTGTTCTAACTTGCAGTTCCTATAGAGTAGAATATAAATGCAGGCTATTGGCTTTACATCTATCAGTACTTGGCATGTATCAATGGAATAAGTTGTTAAT TGTTACCCACAACATAATGTGCCTTCCAATAATTCATGATCTGATTAGATTTTATAATACATGGCACAAGAAACATAACTTTATATACACAAATGCTCAT ATAATCTCATATTTGTTTTTAGTAAGACATTGTTCCATGATTATGCATCATCTTTGTTTGAATTTTTGACAGATATCAAAGCGTTTAGAGGAACTGACAC AAGAGTATGAGAAGAATGGAAAAGTGGCTCAATCTGGAGAACTTTCAGAAAAACATTAAGTTCCACTCTTCCAGGGCAACTGAAACATGATTAACATGAT TCTATATTCTTTTCAAATTGTTTCCACATGTTGCATACTTTGAACAGATATGTTAGATAAATGACTTTTATCTTCAAATTCAATCTTTTTGAGCTTTAAT GAATATTCGAAATATGTAAGTAGAATCCTTCACTTTTTGTGATTCCATTTCGTGGAGCCAAATATATTGGTATGACAAATTCTGTTGCATTTCCTTTTCA TTTCATTCAGCCATACATATACTCTCAACTTTGAAAAGTGATTTCACATTTTTTATTTTATTTTTGCAAGAGTAAACATTG
• Tissue: pods
• Gene name: LI_gene_189003;
• Additional information: details;

Expression of Ll_transcript_398860

FPKM

• PAB: 0.7
• PNAB: 0.7
• PS1: 0.4
• PS2: 0.2
• PS3: 0.3
• PW1: 0.2
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398860

• Blastp: Ecotropic viral integration site 5 protein homolog from Homo with 41.79% of identity
• Blastx: Ecotropic viral integration site 5 protein homolog from Homo with 42.79% of identity
• Eggnog: ecotropic viral integration site(ENOG410YWJY)
• Kegg: Link to kegg annotations (7813)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419899.1)
• Pfam: Rab-GTPase-TBC domain (PF00566.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;