| Id Trinity | TRINITY_DN51973_c3_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_397040 |
| Sequence | CCGTAAACGATGGATACTAGGCGTTGTGTGTATCGACCCGTGCAATGCTGTAGCTAACGCTAGGGAAGAAAATAGATTTATGAATGGAATAAAATATGCA GTATTTACAGACAAAAGTATTCGGTTATTGGTGAAAAATCAATATACTTTTAATGTCGAATCGGGATTAACTAGGACAGAAATAAAGCATTGGGTCGAAC TCTTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCGGTAAAGGGTAGAAGAATGCGACCTATTATGGGACATACAATGCATTACAGACG TATGATCATTACGCTTCAACCGGGTTATTCTATTCCACCTCTTAGAAAGAAAAGAACTTAAATCAAAATACTTAATAACATGGCGATACATTTATACAAA ACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTGAAATCCAATCCACGAAAAAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGCC GTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGGCGGAATGAAAAGGACATATATGG TAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACACCCCAGAGGG GCTATCATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGACCGATATGCCCTTAGGCACGGCCATACATA ACATAGAAATCACACTCGGAAAGGGTGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATT ACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAGGTGGGGAATGTTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGA TCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTA GAAAAAAACCCGCAACTCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTGCGTCGCCGTAGTAA ATAGTAAAGTCGAGAAAATAGAATTTGTTTCTTCGTCTTAAAAAAAAATAGGAGTAATTGACTGTGACATGACACGTTCACTAAAAAAAAATCCTTTTGT AGCGAATCATTTATTAATAAAAATAAATAAACTTAACACAAAAGCAGAAAAAGAAGTAATAATAACTTGGTCGAGAACATCTACCATTATACCCACAATG ATTGGCCATACCATTGCTATCCACAATGGAAAAGAACATCTACCATTATACCCACAATGATTGGCCATACCATTGCTATCCACAATGGAAAAGAACAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_189010; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_397040
| Blastp | 50S ribosomal protein L2, chloroplastic from Cucumis with 99.27% of identity |
|---|---|
| Blastx | 50S ribosomal protein L2, chloroplastic from Cucumis with 99.26% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (3429292) |
| CantataDB | Link to cantataDB annotations (CNT0000963) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003606061.1) |
| Pfam | Ribosomal Proteins L2, RNA binding domain (PF00181.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |