| Id Trinity | TRINITY_DN51973_c3_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_397054 |
| Sequence | TGAATATATTAACTATTTCTTTATTTTTCGATCGCCTGGAAAGAACAAAAGAAACATCTTGTTCTTTCTTCAACAATTTCTGATCTCTAGTGGACCTCTC AGTAGGATTCGAACCCAGATGAAGTTCTGACCATCTGTCAGAGAAAAAAGAACGATTCACTCTGTATCAATGGAATCTCATCATCCATACATAACGAATT GGTGTGGTATATTCAAATCATAACATATGAACAGTAAAAACTAGTAGTCTTATTGAGACTAGAACTCATAGGGAAGAAAATAGATTTATGAATGGAATAA AATATGCAGTATTTACAGACAAAAGTATTCGGTTATTGGTGAAAAATCAATATACTTTTAATGTCGAATCGGGATTAACTAGGACAGAAATAAAGCATTG GGTCGAACTCTTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCGGTAAAGGGTAGAAGAATGCGACCTATTATGGGACATACAATGCAT TACAGACGTATGATCATTACGCTTCAACCGGGTTATTCTATTCCACCTCTTAGAAAGAAAAGAACTTAAATCAAAATACTTAATAACATGGCGATACATT TATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTGAAATCCAATCCACGAAAAAATTTGATCTATGGACAGCATCGTTGTGG TAAAGGCCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGGCGGAATGAAAAGGAC ATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTACACC CCAGAGGGGCTATCATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGACCGATATGCCCTTAGGCACGGC CATACATAACATAGAAATCACACTCGGAAAGGGTGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACA TTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAGGTGGGGAATGTTGGGGTAAACCAGAAAAGTTTGGGTA GAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCC AATTGGTAGAAAAAAACCCGCAACTCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTTGATTCTGCGTCGC CGTAGTAAATAGTAAAGTCGAGAAAATAGAATTTGTTTCTTCGTCTTAAAAAAAAATAGGAGTAATTGACTGATTTTTTATGTTATTTTTTTATCTTTGA TATTCATTTCAATTTCTGGGCGAACGACGGGAATTGAACCCGCGCATGGTGGATTCACAATCCACTGCCTTGATCCACTTGGCTACATCCGCCCCTAATA CTATATAAAAATAACCTAAATTTCAATTTCTACCCCTTCATTCTTTTTTTTTAAGAAAAAAATAAAATAAAGAATGGTGATTTACTTCAACATTATTTTA TTTATATATAAATAAAATAAGAAAACTTTAAAAAATTTAATCTAAATAAAGAAGTGAGAGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_189010; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_397054
| Blastp | 50S ribosomal protein L2, chloroplastic from Cucumis with 99.27% of identity |
|---|---|
| Blastx | 50S ribosomal protein L2, chloroplastic from Cucumis with 99.26% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (3429292) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003606061.1) |
| Pfam | Ribosomal Proteins L2, RNA binding domain (PF00181.22) |
| Rfam | tRNA (RF00005) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |