| Id Trinity | TRINITY_DN51973_c3_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_397031 |
| Sequence | CACAAACTTGCTTCAATGGATTTTACTAAAGCTTCCAACTTAACACTTTCTTCACCATTTCTCACCACAACTACATTCTCTTTCATTCCTCCACCTCCCA CAAAATTTTCTTTTCATTTTTGCCCCTACCCATTTCCATGTATTCCGATAAAGCCCCTAACTTTGCGTGCCACGAGAAACCAAAGTCACGATTCAGACCC AATCCTCGAATCTACTATTGTTCAAGAAGAAGAAGAAGACGAAGATGATGATGATGGTGATGATGGTGATGACGTCATTGACGATGACGCTTCACTAGAT GTTGAAGATGATGGTTTTGAAGTTGATGGTGATTATGAGGTGAATGAAGAAGAAGTAGAAGAGGAAGAATATGTAGGTGATGGTGGCGCGGGTGGTGGAG TTTCTCTTGCTGGAACATGGTGGGATAAAAAAGCACTAGCCATTGCTAGAGAGGTTACTACATCTTTTGATGGTGACCTGCAAATTTATGCTTTTAGAAC CTTGGTCAATTCAACCATTCAAGTACGCATTGAGAAGCTTTCGAACAAGTCTGGCTCTCCCAGCATGGAAGATATTGAAGCCTTTTCTACAACTTATAGA GCCAAATTGGATGAAGCAGAACTCGCTAAAGTTGTTCCAGAGAATTTATATTTGGAGGTGTCTTCCCCTGGTGTTGAACGGATAGTTCGGATACCAAATG ACCTTGATCGATTCAAGGACCGACCTATGTATGTGAAATATGCCATTGTCGATGATTCCAATAATACATCCGGAGAACGAGATGGCATTTTCAAGCTTGA ATCCTTTGACATGGAAACAAAATGTTGCACCTGGGGTGTAGCCGATGTGAGAGTCAATAGAGGGAAAGGAAGACCACTTAATAAAAAACAAAGAGAATGG CGTTTAAGTACTCCCTTTGATTCCTTACTCTTAGTAAGGATACACTCTGATTGTTGAATAAATTATTTTCACTGACATTTGATAATTATATCTCCATCTT TCTTTGTATAAGCATATAACCAATTGCATATGCATATGTAGATAATCAGAGGACAATTGAATTTTTGTTATGAGTTTTTCTTTTGGTATGTGTTATGAGT TTTTTGTTTTAAGAAATTCATGCTCTAAATGTGTGTTCTTTAATTTGTATTTAAGAAATTCAGGCTTATCATTATCTAGCAAATATTTAATATTTTAATT TGTGCAACTTATGCATCAATATCAAGCAAATATTTCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_189010; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_397031
| Blastp | - |
|---|---|
| Blastx | Ribosome maturation factor RimP from Leptospira with 36.11% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414265.1) |
| Pfam | RimP N-terminal domain (PF02576.16) |
| Rfam | - |
| GO | - |