Ll_transcript_399475

• Id Trinity: TRINITY_DN51975_c1_g1_i11
• Name Transcript: Ll_transcript_399475
• Sequence: CAGAATTAAAAAGGAAGAATGAGGAAGATACTCTAATTGTTGATGTTTTAACTATGGATAATAAAAAGATGAAGTCCACTAAAGAGGATTAAAGAAGGCT CACTCAACCTCGACCCGAGAGTCAAATCACACTAAACAGCTTTTCCATTTCACTAACAATTCACTGTTACACACTAAGTGTTTGAGAAAATGTCAATCTC CGTACCCACACGACAACTATTCATAGATGGAGAATGGAAAGCTCCATTACTCAACAAACGAATTCCAATCATCAATCCCTCCACCCAACAAATCATTGGT GATATCCCAGCAGCTACTAAGGAAGATGTAGATCTTGCTGTTGCTGCTGCCAAATCAGCTTTGTCTCGTAACAAAGGTGCAGATTGGGCTTCTGCTTCTG GATCCGTTCGTGCACGTTATCTTCGTGCCATCGCTGCAAAGATCACTGAGAAAAAGACTGAGCTGGGAAAACTTGAATCACTTGATTGTGGAAAACCACT TGATGAAGCTCTATGGGATGTGGATGATGTTGCTGGCTGCTTTGATTACTATGCTGACCTTGCTGAAAATTTGGATAAAAAGCAAAAGTCGCCTGTTTCT CTTCCCTTGGAGACATTCAGGAGTTATGTTCTTAAGGAGCCTATCGGAGTAGTTGGACTGATCACACCATGGAACTACCCTATGTTAATGGCTACGTGGA AGGTTGCTCCAGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCATCTGAATTGGCATCTGTGACCTGCTTGGAGCTGGCTGAAATATGCAGAGAAGT AGGCCTTCCTCGAGGTGTATTAAACGTTCTCACTGGATTAGGCCCTGAAGCTGGTGCTCCTTTAGCATCCCATCCAGATGTTGACAAGATTGCTTTCACC GGAAGTTCTGCAACTGGGAGCAAGATTATGACAGCTGCAGCACAGCTGGTCAAGCCCGTTTCACTGGAGCTTGGTGGAAAAAGCCCACTCGTTGTTTTTG AGGATGTTGACATTGATAAGGCTGTTGAATGGGCCCTCTTTGGCTGCTTCTGGGTAAATGGTCAGATATGCAGTGCAACTTCCCGCCTTATATTACATGA AAGTATTGCAACAGAGTTTTTGAATAGGCTTGTGAAATGGGCCAAAAACATCAAAATTTCAGATCCCTTGGAGGAGGGCTGCAGGCTAGGTCCTGTTGTT AGTGAAGGACAGTATGAAAAAATATTGAAGTTTATCTCAAATGCCAAGAGTGAGGGTGCAACGATTTTGACCGGCGGGTCTCGCCCAGAGCATCTGAAGA AAGGTTTCTTTATTGAACCAACCATCATAACTGATGTAACTACCTCCATGCAAATTTGGAGGGAAGAAGTATTTGGGCCTGTTCTCTGCGTAAAAACATT TAGTACTGAGGAAGAAGCTATTGATCTAGCGAATGACACCATGTGAGTTGGTGATTTTCTACAAATTGATATTAACTTCATATGTGAACCGTTTCTTATT CTTTGTGCATCGATACCTAAAGTTCTACATATTTGGATCTTTCACAGCTATGGCTTAGGTTCTGCTGTAATATCAAATGATCTAGAAAGATGTGACCGCT TAACTAAGGTGCGAATGATCCGAAGTTATCATAGAAAACAACAGGACTATTTATCTAATTGAATAGTTTATCTTGTCTCATTGCAGGCTTTTAAGGCTGG AATTACGTGGATCAATTGCTCTCAACCATGCTTCACTC
• Tissue: pods
• Gene name: LI_gene_189034;
• Additional information: details;

Expression of Ll_transcript_399475

FPKM

• PAB: 0.3
• PNAB: 0.1
• PS1: 0.6
• PS2: 0
• PS3: 0.7
• PW1: 0.8
• PW2: 0.2
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399475

• Blastp: Betaine aldehyde dehydrogenase 1, chloroplastic from Arabidopsis with 82.25% of identity
• Blastx: Betaine aldehyde dehydrogenase 1, chloroplastic from Arabidopsis with 72.29% of identity
• Eggnog: Dehydrogenase(COG1012)
• Kegg: Link to kegg annotations (AT1G74920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463490.1)
• Pfam: Aldehyde dehydrogenase family (PF00171.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;