Ll_transcript_399481

• Id Trinity: TRINITY_DN51975_c1_g1_i15
• Name Transcript: Ll_transcript_399481
• Sequence: CAGAATTAAAAAGGAAGAATGAGGAAGATACTCTAATTGTTGATGTTTTAACTATGGATAATAAAAAGATGAAGTCCACTAAAGAGGATTAAAGAAGGCT CACTCAACCTCGACCCGAGAGTCAAATCACACTAAACAGCTTTTCCATTTCACTAACAATTCACTGTTACACACTAAGTGTTTGAGAAAATGTCAATCTC CGTACCCACACGACAACTATTCATAGATGGAGAATGGAAAGCTCCATTACTCAACAAACGAATTCCAATCATCAATCCCTCCACCCAACAAATCATTGGT GATATCCCAGCAGCTACTAAGGAAGATGTAGATCTTGCTGTTGCTGCTGCCAAATCAGCTTTGTCTCGTAACAAAGGTGCAGATTGGGCTTCTGCTTCTG GATCCGTTCGTGCACGTTATCTTCGTGCCATCGCTGCAAAGATCACTGAGAAAAAGACTGAGCTGGGAAAACTTGAATCACTTGATTGTGGAAAACCACT TGATGAAGCTCTATGGGATGTGGATGATGTTGCTGGCTGCTTTGATTACTATGCTGACCTTGCTGAAAATTTGGATAAAAAGCAAAAGTCGCCTGTTTCT CTTCCCTTGGAGACATTCAGGAGTTATGTTCTTAAGGAGCCTATCGGAGTAGTTGGACTGATCACACCATGGAACTACCCTATGTTAATGGCTACGTGGA AGGTTGCTCCAGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCATCTGAATTGGCATCTGTGACCTGCTTGGAGCTGGCTGAAATATGCAGAGAAGT AGGCCTTCCTCGAGGTGTATTAAACGTTCTCACTGGATTAGGCCCTGAAGCTGGTGCCCCTTTAGCATCCCATCCGGACGTAGACAAGGTTCAATTGCCC TGAGTGTTTTAGTATGATTGAAATTATATAGGGTTATATCCTGTTCTATTTCTCGCAAATATCATTATTATCATGTCTTTAAGTCTGCAACGTTACTATC AAATCATGGCAAACTTTTTTCCAACAGATTACTTTCACTGGTAGCAATGCAACTGGGAGCAAGATTATGACAGCTGCAGCTCAGCTGGTCAAGCCTGTTT CACTCGAGCTGGGTGGAAAAAGCCCAATCGTTATTTTTGAGGATGTTGACCTCGATAAGGCTGCTGAATGGGCCCTCTTTGGCTGCTTCTGGGTAAATGG TCAGATATGCAGTGCAACTTCCCGCCTTATTGTACATGAAAGTATTGCCACGGAATTTTTGAATAGGCTTGTGAAATGGGCCAAAAACATCAAAATTTCA GATCCCTTTGAAGAAGGTTGCAGGCTAGGCCCTGTTATTAGTGAAGGGCAGTATGAAAAAATATTGAAGTTTATCTCAAATGCCAAGAGTGAGGGTGCAA TAATTTTGACTGGTGGTTCTCGCCCAGAGCATCTAAAGGAAGGATTCTTTATTGAACCAACCATCATAAGCGCTGTGACTACCTCCATGCAAATTTGGAG GGAGGAAGTATTTGGACCTGTTCTCTGTGTAAAAACATTTAGTACTGAGGAAGAAGCTATTGATCTAGCAAATGACACCATCTATGGCCTAGGTTCTGCT GTATTATCAAATGATCTAGAAAGATGTGAGCGCTTAAGTAAGGCTTTTAAGGCTGGAATTGTATGGGTCAATTGCTCTCAACCATGCTTCACTGAAGCCC CATGGGGAGGCAACAAACGTAGTGGTTTTGGTCGTGACTTAGGAGAATGGTATGACCCTTATTTCTTAACTCACCAAATCTGACATTAATCTTTATTGTC TTTTTTTAAACTTATGGATTAGAGATGATTTAAACATCATAATTCATACATGCGAAAGAAACACATGTGGAATGAAGTCTATGGATTGTTGAGTGCACTA TAATCATACCCTATTTGCAATTTATTGACCGTTGTATTCTGTGCCACCAAATTCAATCTAATTGTCTACAAAGCTGACAACATAGTGTGGAACTAGTAAA GCCCTTGAACTGTTGAATTGGAATAATTAAAACTCAGAGAGATTTGTGATGCTTTGATCCATTTAAACTAATTATAGTAATGCTAATCTTGTTGTACAGT GAATAACAATTAAATGTCATGCTAGTTTCCATAGCAGCTTACTGGTTCGTCGAGTTTATCGAAATTTGTATGTTCCTTTGGTTTGAAACTGGCATAATGA GAGAATTGGGTCTAAGAGACAATACAATAAAATCCTGCAAAATTGCAATTGAGAAATCATGCCTTGATCTGTAAGCTTGTCTGATTTATTTTTTCAGGGG ACTTGATAACTACTTGAGT
• Tissue: pods
• Gene name: LI_gene_189034;
• Additional information: details;

Expression of Ll_transcript_399481

FPKM

• PAB: 8.9
• PNAB: 7.8
• PS1: 6.6
• PS2: 1.8
• PS3: 2.4
• PW1: 20.6
• PW2: 23.9
• PW3: 10.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399481

• Blastp: Betaine aldehyde dehydrogenase 1, chloroplastic from Arabidopsis with 77.97% of identity
• Blastx: Betaine aldehyde dehydrogenase 2, mitochondrial from Arabidopsis with 74.03% of identity
• Eggnog: Dehydrogenase(COG1012)
• Kegg: Link to kegg annotations (AT1G74920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020980006.1)
• Pfam: Aldehyde dehydrogenase family (PF00171.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;