Ll_transcript_399494

• Id Trinity: TRINITY_DN51975_c1_g1_i20
• Name Transcript: Ll_transcript_399494
• Sequence: CAGAATTAAAAAGGAAGAATGAGGAAGATACTCTAATTGTTGATGTTTTAACTATGGATAATAAAAAGATGAAGTCCACTAAAGAGGATTAAAGAAGGCT CACTCAACCTCGACCCGAGAGTCAAATCACACTAAACAGCTTTTCCATTTCACTAACAATTCACTGTTACACACTAAGTGTTTGAGAAAATGTCAATCTC CGTACCCACACGACAACTATTCATAGATGGAGAATGGAAAGCTCCATTACTCAACAAACGAATTCCAATCATCAATCCCTCCACCCAACAAATCATTGGT GATATCCCAGCAGCTACTAAGGAAGATGTAGATCTTGCTGTTGCTGCTGCCAAATCAGCTTTGTCTCGTAACAAAGGTGCAGATTGGGCTTCTGCTTCTG GATCCGTTCGTGCACGTTATCTTCGTGCCATCGCTGCAAAGATCACTGAGAAAAAGACTGAGCTGGGAAAACTTGAATCACTTGATTGTGGAAAACCACT TGATGAAGCTCTATGGGATGTGGATGATGTTGCTGGCTGCTTTGATTACTATGCTGACCTTGCTGAAAATTTGGATAAAAAGCAAAAGTCGCCTGTTTCT CTTCCCTTGGAGACATTCAGGAGTTATGTTCTTAAGGAGCCTATCGGAGTAGTTGGACTGATCACACCATGGAACTACCCTATGTTAATGGCTACGTGGA AGGTTGCTCCAGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCATCTGAATTGGCATCTGTGACCTGCTTGGAGCTGGCTGAAATATGCAGAGAAGT AGGCCTTCCTCGAGGCGTATTAAACATTCTCACTGGATTAGGCCCTGAAGCCGGTGCTCCTTTAGCATCTCACACCGATGTAGACAAGATTGCTTTCACC GGAAGCTCTGCAACTGGGAGCAAGATTATGACAGCTGCAGCACAGTTGATCAAGCCTGTTTCACTAGAGCTCGGTGGAAAAAGCCCCATCGTTGTTTTCG AGGATGTTGACCTTGATAAGGCTGCTGAATGGACCCTCTTTGGTTGCTTCTGGACAAATGGTCAGATATGCAGTGCGACTTCGCGCCTTATTGTACATGA AAGTATTGCAACAGAATTTTTGAACAAGCTTGTGAAATGGGCCAAAAACATCAAAATTTCGGATCCTTTCGAGGAAGGTTGCAGGCTAGGCCCTGTTGTT AGTGAAGGACAGTATGAAAAAATATTGAAGTTTATCTCAAATGCCAAGAGTGAGGGTGCAACGATTTTGACCGGCGGGTCTCGCCCAGAGCATCTGAAGA AAGGTTTCTTTATTGAACCAACCATCATAACTGATGTAACTACCTCCATGCAAATTTGGAGGGAAGAAGTATTTGGGCCTGTTCTCTGCGTAAAAACATT TAGTACTGAGGAAGAAGCTATTGATCTAGCGAATGACACCATCTATGGCTTAGGTTCTGCTGTAATATCAAATGATCTAGAAAGATGTGACCGCTTAACT AAGGCTTTTAAGGCTGGAATTACGTGGATCAATTGCTCTCAACCATGCTTCACTCAGGCCCCATGGGGAGGCAACAAACGAAGTGGTTTTGGTCGTGAAT TAGGAGAATGGGGACTTGATAACTACTTGAGTGTGAAGCAAGTAACTCAGTATATCTCTGATGAAGCTTGGGGCTGGTACCAGAGTCCTTCATAATTAAA TTTATGATAAGCTGTTGTTGTAATAACTGACATGCAATAAGGTGTGGATAAAACCAAATTTCTTCAGTAATGCATAGATTTATATTATGTTTTTGTATGT TTAAATGCCTTTTGTTGGATTTTGATTTCTGCTAGCCTCACCTTTTAGCCTCTAATATTTGCAAGCATTGTATCCAATCTGGTAGCAGTATTTTTAAAGT AAGTTATTTTACAGGCACAGATATCATATGAAAACAGATATTTTATGGTGAGTGAAATTGACAATATTGTAGCAAAGTAAAGGAGAGCACCACCAACCTC ATATGCCACTACCTTTAACTACAAATGAAATGTTATTAATAGGTATTAATGTTTTACAGAGGAACTTCAATTACAGTTGTATCCCGCTCCCCTATTACAG TTTTATCAGTTTGATTCATTCACAAGGTCG
• Tissue: pods
• Gene name: LI_gene_189034;
• Additional information: details;

Expression of Ll_transcript_399494

FPKM

• PAB: 13.5
• PNAB: 14.5
• PS1: 14.4
• PS2: 14.1
• PS3: 20.1
• PW1: 19.9
• PW2: 20.4
• PW3: 16.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_399494

• Blastp: Betaine aldehyde dehydrogenase 1, chloroplastic from Arabidopsis with 82.04% of identity
• Blastx: Betaine aldehyde dehydrogenase 1, chloroplastic from Arabidopsis with 82.04% of identity
• Eggnog: Dehydrogenase(COG1012)
• Kegg: Link to kegg annotations (AT1G74920)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463490.1)
• Pfam: Aldehyde dehydrogenase family (PF00171.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;