Id Trinity | TRINITY_DN51978_c0_g1_i15 |
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Name Transcript | Ll_transcript_398168 |
Sequence | ATTATCCATCAACTCCACCATGGTGACGTTGGTAACACCTCCACCACCCTTCTTATCCATAACCACACAGAGCAAGAAGAACAACAAGAACAAGAACAAG AAGAAGCGAACTTTGAGGAATTTCATTCACTTCTCCCTTAAGAGAGGATTTGGTAACACTGCTCATAAACTAAACAACCTTCTATGGCTTCGCAATCTCG AAGACCCTCTTGCTTCTCCCTTTTCTCTACCTTCCTTCCCTCAACCATGCTACCCAGGACTAACTGGAGTAGATTTGCTCATATCTGATCTTAAGGCATT GGAAGCATATGCTAGCTACTTCTATTATTTCTCTAAGATTTGGTCTATGCCACTTCCTCAAGTTTATGATCCTCAACATGTTGCTCACTATTTCAGTGCC AGACCCCATCTTGTGGCCCTTCGTATTCTAGAGGTATTTTCCTCCTTCACTTCTGCCATGATCAATATTCGAACTTCGGAGTTTAGGAAGTTTCTAGGAC TAAATCCAGAAGAGGACGTGGATGATAAAACATCACAATATAATTTTGGGATGGTGTTAAAGGAAACAATGCTTAATCTTGGTCCCACTTTTATAAAAGT TGGTCAGTCCCTTTCCACAAGGCCAGATATCATTGGTGTTGAGATGTCCAAGGCATTGTCTGGACTGAATGATCAAATCCCCCCTTTTCCAAGGACTGCT GCTATGAAGATTATAGAGGAAGAATTAGGTTCTCCTTTGGAATCATTCTTCAGTTACATTTCTGAGGAACCAATAGCTGCTGCATCATTTGGTCAGGTTT ACTTTGCCCGTACTACTGATGGAATTAATGTTGCTGTAAAAGTTCAACGTCCTAATTTGCGTCATGTAGTGGTGCGGGATATCTACATTCTTCGCCTTGG GGTTTGTACTAGCTAGTAACTATTGATTTCTTTATCTTCTTTTTTTCTTGTATTACACTGTCCTGCATTTCTTGAATGAGTTTATATTAACCATTTCAGT TGGGGCTGCTGCAAAAAATTGCCAAGAGAAAGAGTGACCCTCGCCTTTATGCTGATGAGCTTGGGAAAGGTTTTGTTTCTGAATTGGATTACAATTTAGA GGCCGCTAATGCTTTGAAGTTTCTGGTAATAAATGACATATTAATTGGAGTTTAATCATACACATTTTTGAGTTCTAGAAACTGGATGATTTAGAGCTTT GATGAAAGCTTTCATTATCAGGGTTTAAATTTCCGCATGTGTGAATGTGATAAATGTAAACCTAAGTTGAATTGGTAACTGACAAAATTTGAAATGACTT TTTATTGCTTCATGCAGGAAGTTCATTCCCCCTTTGCTTTCATCCGTGTGCCTAAAGTATATACACATTTAAGTCGAAAGAGAGTTCTGACCATGGAATG GATGGTTGGTGAAAGTCCAACAGATTTGCTTTCTTTATCTACTGGAAACTCTATTGGAGATGTCTCTGAATATTCAGACAAGCAGAAAGTGGCTGCAAAA ATGCGTCTTCTTGATATGGTCAACAAAGGTGTTGAGGCAACATTGGTACAACTTCTTGAAACAGGCTTACTACATGCTGATCCACATGCTGGTAACTTGC GTTACACCCCCTCAGGACAAATAGGGTTTCTAGATTTTGGTTTGCTTTGTCAAATGGAAAAAAAGCATCAAATTGCTATGCTGGCTTCAATAATTCATAT TGTAAATGGTGACTGGGCATCCCTTGTCCGTGCTCTGATTGATATGGATGTTGTGAGGCCAGGGACAAATATCCGACTCGTTACCTTGGAGCTGGAACTG GCCTTGGGAGAAGTTGAATTTAAAGAAGGAATTCCTGATGTGAAGTTCAGTAGGGTTCTGGGAAAGATATGGTCAGTAGCCTTCAAGCATCATTTCCGTA TGCCGCCATATTATACACTTGTCTTACGATCTCTAGCTTCCTTCGAAGGTACTGTGAATACCGCATTCAAATTACTTCTCAGATGCTCATCAATTCTCAT ACTGTTAAGTTCTATTCATCCTGTATGCATCAACATGTGGTAATTAGAAATCTTTTTTCTGACTTTCTAATATTCTCATTTCATTGTCTTCGTCTTGTGT TTTTCATTGAAACAATTTCAGGCTTGGCTATAGCTGCAGATAAAAACTTCAAGACTTTTGAAGCTGCATACCCTTATGTTGTTCGGAAACTTCTCACAGA AAACTCTGCTGGAACAAGGAATATATTGCATTCGGCGCTTC BLAST |
Tissue | pods |
Gene name | LI_gene_189065; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_398168
Blastp | Uncharacterized protein slr1919 from Synechocystis with 40.56% of identity |
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Blastx | Uncharacterized protein slr1919 from Synechocystis with 40.56% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (slr1919) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020235143.1) |
Pfam | ABC1 family (PF03109.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |