| Id Trinity | TRINITY_DN51978_c0_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_398174 |
| Sequence | ATTATCCATCAACTCCACCATGGTGACGTTGGTAACACCTCCACCACCCTTCTTATCCATAACCACACAGAGCAAGAAGAACAACAAGAACAAGAACAAG AAGAAGCGAACTTTGAGGAATTTCATTCACTTCTCCCTTAAGAGAGGATTTGGTAACACTGCTCATAAACTAAACAACCTTCTATGGCTTCGCAATCTCG AAGACCCTCTTGCTTCTCCCTTTTCTCTACCTTCCTTCCCTCAACCATGCTACCCAGGACTAACTGGAGTAGATTTGCTCATATCTGATCTTAAGGCATT GGAAGCATATGCTAGCTACTTCTATTATTTCTCTAAGATTTGGTCTATGCCACTTCCTCAAGTTTATGATCCTCAACATGTTGCTCACTATTTCAGTGCC AGACCCCATCTTGTGGCCCTTCGTATTCTAGAGGTAGTTGAAAGGAAGTTTCTAGGACTAAATCCAGAAGAGGACGTGGATGATAAAACATCACAATATA ATTTTGGGATGGTGTTAAAGGAAACAATGCTTAATCTTGGTCCCACTTTTATAAAAGTTGGTCAGTCCCTTTCCACAAGGCCAGATATCATTGGTGTTGA GATGTCCAAGGCATTGTCTGGACTGAATGATCAAATCCCCCCTTTTCCAAGGACTGCTGCTATGAAGATTATAGAGGAAGAATTAGGTTCTCCTTTGGAA TCATTCTTCAGTTACATTTCTGAGGAACCAATAGCTGCTGCATCATTTGGTCAGGTTTACTTTGCCCGTACTACTGATGGAATTAATGTTGCTGTAAAAG TTCAACGTCCTAATTTGCGTCATGTAGTGGTGCGGGATATCTACATTCTTCGCCTTGGGTTGGGGCTGCTGCAAAAAATTGCCAAGAGAAAGAGTGACCC TCGCCTTTATGCTGATGAGCTTGGGAAAGGTTTTGTTTCTGAATTGGATTACAATTTAGAGGCCGCTAATGCTTTGAAGTTTCTGGTAATAAATGACATA TTAATTGGAGTTTAATCATACACATTTTTGAGTTCTAGAAACTGGATGATTTAGAGCTTTGATGAAAGCTTTCATTATCAGGGTTTAAATTTCCGCATGT GTGAATGTGATAAATGTAAACCTAAGTTGAATTGGTAACTGACAAAATTTGAAATGACTTTTTATTGCTTCATGCAGGAAGTTCATTCCCCCTTTGCTTT CATCCGTGTGCCTAAAGTATATACACATTTAAGTCGAAAGAGAGTTCTGACCATGGAATGGATGGTTGGTGAAAGTCCAACAGATTTGCTTTCTTTATCT ACTGGAAACTCTATTGGAGATGTCTCTGAATATTCAGACAAGCAGAAAGTGGCTGCAAAAATGCGTCTTCTTGATATGGTCAACAAAGGTGTTGAGGCAA CATTGGTACAACTTCTTGAAACAGGCTTACTACATGCTGATCCACATGCTGGTAACTTGCGTTACACCCCCTCAGGACAAATAGGGTTTCTAGATTTTGG TTTGCTTTGTCAAATGGAAAAAAAGCATCAAATTGCTATGCTGGCTTCAATAATTCATATTGTAAATGGTGACTGGGCATCCCTTGTCCGTGCTCTGATT GATATGGATGTTGTGAGGCCAGGGACAAATATCCGACTCGTTACCTTGGAGCTGGAACTGGCCTTGGGAGAAGTTGAATTTAAAGAAGGAATTCCTGATG TGAAGTTCAGTAGGGTTCTGGGAAAGATATGGTCAGTAGCCTTCAAGCATCATTTCCGTATGCCGCCATATTATACACTTGTCTTACGATCTCTAGCTTC CTTCGAAGGTACTGTGAATACCGCATTCAAATTACTTCTCAGATGCTCATCAATTCTCATACTGTTAAGTTCTATTCATCCTGTATGCATCAACATGTGG TAATTAGAAATCTTTTTTCTGACTTTCTAATATTCTCATTTCATTGTCTTCGTCTTGTGTTTTTCATTGAAACAATTTCAGGCTTGGCTATAGCTGCAGA TAAAAACTTCAAGACTTTTGAAGCTGCATACCCTTATGTTGTTCGGAAACTTCTCACAGAAAACTCTGCTGGAACAAGGAATATATTGCATTCGGCGCTT C BLAST |
| Tissue | pods |
| Gene name | LI_gene_189065; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_398174
| Blastp | Uncharacterized protein sll0005 from Synechocystis with 41.23% of identity |
|---|---|
| Blastx | Uncharacterized protein sll0005 from Synechocystis with 31.01% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (sll0005) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427497.1) |
| Pfam | ABC1 family (PF03109.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |