Ll_transcript_398147

• Id Trinity: TRINITY_DN51978_c0_g1_i3
• Name Transcript: Ll_transcript_398147
• Sequence: TTAATGAATATACTAGACACCAGCAACCACATATATGATAGATTAGATAAATATTAAAAATTCACCATCACATATTCCAAATGCACATTCTTCATTTTTA ACAACTCTTATCCCTCCACCATCCCATGGCGACGGTGATATCGCCACCGCCACCGCTCCTCTCCGTCCACTGCTCCGCTTCATCGAGGATTCCCCACAGC AAAAACAAGAAGCAGCGAGATTTCGGGAATTTCAACCACTTCGCCAACACAGTTACCAAGGACGTGGAATTCATCAAGAGAGGTATCGGTAACGGTGTTG CTTGGGCCAATGAAACATTCCGCATTCCTCAACTTGCTCAGAAAGTGGACCAACTTGTGTGGCTTCGTCATCTCGAAGATCCTATTGATTCTCTCTCTCC TCTTCCTTCTTTACCTCAACCATGGTATCCAGGACTAACTGGAGTGGATTTACTCATGTCTGATCTCAAGGCATTGGAAGCATATGCTAGTTACTTTTAT TACTTGTCTAAGATTTGGTCTAAGCCACTTCCTGAAGTTTATGATCCTCAGGATGTTGCTCACTATTTCAATGTCCGGCCCCATGTGGTGGGACTCCGTA TTCTAGAGGTACATGGATTAACCTTTGTAATAAGTACTTGCAATGATTCTTTGAATCTTCTCATTTTCTTCTTAAGTGATTAGGTTAGCATGTGAAAGTT TCCGAGTTTTAATATCTATATCTCAAACATTTCTTTTATTTAGCTTTCCTTTTAGCTTGAGTACATGCTCATATGTGGCCTGCTCGTTTTAATATGATAC CACAGTAATCCATTTTGTGTTAGTAGGAGATATTTGGTTAATGCATTTATAAAATGGTATAAATGTACTAACCTAGTGACTAAGCTCATGAAGGATTGTG ATAGACCCATGAAAGTCAGTGTGTTTCATCCAAGCAGCATTCACATTTTTTTCTTAGTATCATAAAAATTGTACGGTACCTAAGAGGCTAAGATTGATAC ATGTAATTTTCGTTGTAATTTTTCTCATTGGCACACCTGTTTTCAATGTTTATCAGTCCATGTAACATAAAATGTCAGTTTTTAGTCAACTTCTATATCT GTAAAGAAATGTCTTTTACTGATAGGGGTTGAAGTTTCAAACTTCAAAAAATTCACCACACATCAGGGAGACATGCTGCATATGTGCACTGTGCTATACA TACACAAAGTTGTCGTAGTAAACTCTACACAGTAGCTAACTTGGTCCTATATTAATGTTCTTATCAATCTGTTAAAATTGGTTACAAAATGCTTTATTGA CCCTTTCTTTATTGGAAGGTATTTTCCTCATTTGCTTCTGCTGCGATCAATATTAGAACTTCAGGGTTTAGAAAGTTTCTACGCCTAAATCCAGAAGAGG GTGTGGATGAGAAAACATCTCAATATAATCTTGGAATGGTGTTTAAGGAAACAATGCTTAATCTTGGTCCCACTTTTATAAAAGTTGGTCAGTCCCTTTC CACAAGGCCAGATATCATTGGTGTTGAGATGTCCAAGGCATTGTCTGGACTGAATGATCAAATCCCCCCTTTTCCAAGGACTGCTGCTATGAAGATTATA GAGGAAGAATTAGGTTCTCCTTTGGAATCATTCTTCAGTTACATTTCTGAGGAACCAATAGCTGCTGCATCATTTGGTCAGGTTTACTTTGCCCGTACTA CTGATGGAATTAATGTTGCTGTAAAAGTTCAACGTCCTAATTTGCGTCATGTAGTGGTGCGGGATATCTACATTCTTCGCCTTGGGTTGGGGCTGCTGCA AAAAATTGCCAAGAGAAAGAGTGACCCTCGCCTTTATGCTGATGAGCTTGGGAAAGGTTTTGTTTCTGAATTGGATTACAATTTAGAGGCCGCTAATGCT TTGAAGTTTCTGGTAATAAATGACATATTAATTGGAGTTTAATCATACACATTTTTGAGTTCTAGAAACTGGATGATTTAGAGCTTTGATGAAAGCTTTC ATTATCAGGGTTTAAATTTCCGCATGTGTGAATGTGATAAATGTAAACCTAAGTTGAATTGGTAACTGACAAAATTTGAAATGACTTTTTATTGCTTCAT GCAGGAAGTTCATTCCCCCTTTGCTTTCATCCGTGTGCCTAAAGTATATACACATTTAAGTCGAAAGAGAGTTCTGACCATGGAATGGATGGTTGGTGAA AGTCCAACAGATTTGCTTTCTTTATCTACTGGAAACTCTATTGGAGATGTCTCTGAATATTCAGACAAGCAGAAAGTGGCTGCAAAAATGCGTCTTCTTG ATATGGTCAACAAAGGTGTTGAGGCAACATTGGTACAACTTCTTGAAACAGGCTTACTACATGCTGATCCACATGCTGGTAACTTGCGTTACACCCCCTC AGGACAAATAGGGTTTCTAGATTTTGGTTTGCTTTGTCAAATGGAAAAAAAGCATCAAATTGCTATGCTGGCTTCAATAATTCATATTGTAAATGGTGAC TGGGCATCCCTTGTCCGTGCTCTGATTGATATGGATGTTGTGAGGCCAGGGACAAATATCCGACTCGTTACCTTGGAGCTGGAACTGGCCTTGGGAGAAG TTGAATTTAAAGAAGGAATTCCTGATGTGAAGTTCAGTAGGGTTCTGGGAAAGATATGGTCAGTAGCCTTCAAGCATCATTTCCGTATGCCGCCATATTA TACACTTGTCTTACGATCTCTAGCTTCCTTCGAAGGCTTGGCTATAGCTGCAGATAAAAACTTCAAGACTTTTGAAGCTGCATACCCTTATGTTGTTCGG AAACTTCTCACAGAAAACTCTGCTGGAACAAGGAATATATTGCATTCGGCGCTTC
• Tissue: pods
• Gene name: LI_gene_189065;
• Additional information: details;

Expression of Ll_transcript_398147

FPKM

• PAB: 0.2
• PNAB: 0.7
• PS1: 0.1
• PS2: 1.1
• PS3: 0.1
• PW1: 0.6
• PW2: 1
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398147

• Blastp: Protein ACTIVITY OF BC1 COMPLEX KINASE 3, chloroplastic from Arabidopsis with 30.65% of identity
• Blastx: Uncharacterized protein sll0005 from Synechocystis with 32.84% of identity
• Eggnog: Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661)
• Kegg: Link to kegg annotations (AT1G79600)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020235143.1)
• Pfam: Phosphotransferase enzyme family (PF01636.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;