Ll_transcript_398150

• Id Trinity: TRINITY_DN51978_c0_g1_i6
• Name Transcript: Ll_transcript_398150
• Sequence: ATTATCCATCAACTCCACCATGGTGACGTTGGTAACACCTCCACCACCCTTCTTATCCATAACCACACAGAGCAAGAAGAACAACAAGAACAAGAACAAG AAGAAGCGAACTTTGAGGAATTTCATTCACTTCTCCCTTAAGAGAGGATTTGGTAACACTGCTCATAAACTAAACAACCTTCTATGGCTTCGCAATCTCG AAGACCCTCTTGCTTCTCCCTTTTCTCTACCTTCCTTCCCTCAACCATGCTACCCAGGACTAACTGGAGTAGATTTGCTCATATCTGATCTTAAGGCATT GGAAGCATATGCTAGCTACTTCTATTATTTCTCTAAGATTTGGTCTATGCCACTTCCTCAAGTTTATGATCCTCAACATGTTGCTCACTATTTCAGTGCC AGACCCCATCTTGTGGCCCTTCGTATTCTAGAGGTATTTTCCTCCTTCACTTCTGCCATGATCAATATTCGAACTTCGGAGTTTAGGAAGTTTCTAGGAC TAAATCCAGAAGAGGACGTGGATGATAAAACATCACAATATAATTTTGGGATGGTGTTAAAGGAAACAATGCTTAATCTTGGTCCCACTTTTATAAAAGT TGGTCAGTCCCTTTCCACAAGGCCAGATATTATTGGCATTGAGATGTCTAAGGCACTGTCTGGACTGAATGATCAAATCCCTCCTTTTCCCAGAGCTGTT GCTATGAAGATTATAGAGGAAGAGTTAGGTTCTCCTTTGGAGTCATTCTTCAGTTACATTTCCGAGGATCCTATAGCTGCTGCGTCATTTGGTCAGGTTT ACTTTGCCCGTACTATAGATGGTATTGACGTTGCTGTAAAAGTTCAGCGTCCTAATTTGCGTCATGTGGTGGTGCGGGACATCTACATCCTCCGTCTTGG GTTGGGGTTGCTGCACAATATTGCAAACAGAAAGAGTGATCCTCGTGTATATGCTGATGAGCTTGGGAAAGGTTTTGTTGGTGAATTGGATTATACTTTA GAGGCTGCAAATGCTTCAAAGTTTCAGGAAGTTCACTCCCCCTTTTCTTTCATTCGTGTGCCTAAAATATATCCACAGTTAAGTCGAAAGAGAGTTCTGA CCATGGAATGGATGGTTGGTGAAAGTCCAACAGATTTGCTTTCTTTATCTACTGGAAACTCTATCGGAAATGTCTCTGAATATTCAGAAAAGCAGAAAGT AGATGCAAAAAAGCGTCTTCTTGATCTGGTATGTAAACAAAAAAAGCATTTATCCATATTGTATATCTTGAATGTTAGAAATATCCTGACTATTACTGTA GGAGCCAATTGAACTATTCACAATAAATATAATTGATGTTTTGCAGTAGAATAAAAAGAAAAGTATGAGTGAGCAACCAGGGAAATTTTGGCCTTCTGAT GCTAAAGAGACTCAATAACAAAATAATAAATATGGCTCTGGGTTGACTCAGTAGTAAAATTTCATCATCAATCTTTCATTAGCTTATTCGACTTTCTTGC TCAACTGGAAAGTTTTCATAAATTAAGAATTATTGATTCTACTGAGACTTTGTTCTGTTTGGTTTCTGAGGCTATTATGAAAGCATCATATTCAATGAAT GGGCACTTATGTCACTTTGAGTAATTCAGGTCAACAAAGGTGTTGAAGCAACACTGGTGCAACTTCTTGAAACAGGCTTATTACATGCTGATCCACATGC GGGTAACTTGCGTTACATCTCCTCAGGACAAATAGGGTTTCTAGATTTTGGTTTGCTTTGTCAAATGGAAAAAAAGCATCAATTTGCTATGCTGGCTTCA ATAGTCCATATAGTAAATGGTGACTGGGCATCCCTTGTCCGTGCTCTGATTGATATGGATGTTGTGAGGCCAGGGACAAATATCCGACTTGTTACCCAGG AGCTGGAACATGCCTTGGGAGAAGTAGAATTTAAAGAAGGAATTCCTGATGTCAAGTTCAGCAGGGTGAGAGTCATCTTTTGACAAGCAGTAATTTAGTA TACGTATTTCAGGTGACGGTGCAAACCATTGTGTATTAGTGTTAAGGGATGGCAATGATAGCATTTCTGACTAATTTTTGGACTAATGATAACTGAAATA TAAATATAGAATGTACTAGTCACTATCTGAAAATAACAACAATTGAGTAAACACCGTTTCTAAAACTGAAATCACCTCAACCAAAGTTCAAAGTGTGTGA AATATCCAAAACCAACCACATTGGAATTGGATATGTCTATAGCTAGACTGAGTATGGATATTCACATAATCAATCATCTCCTTGGATGAATATTGGTAGT TATATAGAAGGCTGTCTTCACCTACAACTTTTTTCAACAGAAATGGTATCAAAGAAATTCAAATTATGTATATATATTCTGTGTCAGGTGTACTAAGGTT AAAAGTAATGGAAGTTAACCATAATCAAACTGGTGATGCTTTTTTGGGCATTGAAACTGATATGTTCAAACAGTATTTCTATTTTGCAGTTCTCTCTCAA TAAATATGTCTTTTATGATAGATAATCAGATTAACTAATTGTTTTGTCTATTTTATTGAGATTCCTACTTCTACCTATTGTGTAAACACAAACAAGTTCC ATTTGAATGCATGCATATTATGAAGGGTGCTTTTGCAGTATTGTTTGATGAGCTTTTAAAAACTCCGGTCTTTCTTGTTTCGGATGAGTGGAACAATATT AACTACATTTTGTAAAGTCGTGGTTTTATAGATAGAAAAAAAGTCATGTTTGTATGGTGTCAAATGCATTATCCATATACCACTTTGCTGAATCAACATT TTCAAATGTAACCTGCTGGTTTAGTTTAAGCCTGATCGGCATTTTCTACTCCGTTAGAACTTGTTCCAACTCTCATCCCACTTTTAAAGGAAAGGAAAAA TTAGGAGATGAGACATTTTGACCTCATTATTTTCTTTCCCTTCCCCTTCCCTCTAGTCCTCTCGAACCAAACACATGGAATTTCTGAATTTATTAATTAT TTATTCTGGAAGCTTTCTTCTCCAGTTACTGAAATTTTCAATAAATTTTCTCCAAGGTTCTGGGAAAGATTTGGTCGGTAGCACTCAAGCACCATTTCCG TATGCCACCATATTATACACTTGTCTTACGATCCCTAGCTTCCTTTGAAGGCTTGGCTATAGCTGCAGATAAAAACTTCAAGACTTTTGAAGCTGCATAC CCTTATGTTGTTCGGAAACTTCTCACAGAAAACTCTGCTGGAACAAGGAATATATTGCATTCGGCGCTTCTAAACAAAAAGAAGGAGTTCCAGTGGCAAA GGCTTTCCCTATTCTTGAGGGTAGGGGCAACTAGAAAAGCCTTGCAATCAGTAGCATCAAACAGTGAGACTTCCCCCGACCATTTACCAAATAAGGCCAC CAATAAGTTTGATGTTGCATACTTAATCTTGAGGCTTTTACCATCCAAAGATGGTGCTGCTCTTAGAAGACTTCTCATGACTGCTGATGGAGCATCATTA ATCAAAGCAGTGGTCTCAAAGGAGGGAAAGTCGTATCGCGAACAACTTTGCAAGATCATAGCTGACACTCTGTACCAATGGATGATTAAACTATTCGAAC AAGGAATTAAAGCTACTCAGAATTCAAGGGTGATATTTGGCAATGGACTTAACAGAGAATCCGGCCTATACTCTAGATCATCCGCGCCTGCATATGATAT CAACTCCATCTTGAGTGATCGACGACTTAGGGTGATATTCTCTCATGTTCTCAAATCTGCAAGCCGCGATAAAATATTGATGCTGCGGTTTTGCTGGGAT TCCCTTCTTATGGTTATTAAAGCTTCAAGTTTGGCTTGTCACCGGGCTATTGTGTCCCTGTCAGAGGCTTACATGGATCAAATATTTGACGCTCCCAAGA GATATGCAGTCAGTGCATAACATTTAGTTAGCACATATTAGTTCTCAAGCATTTTGAAATAGAGCACTCTCTTGTAGTTGAGCATTTTTCATTCGAGTTA AATCCACCAAAAGAACCTGGTGTAAGAACAAATCCTCATATTTATATATAGAGGGGAGAGTCAAAAATGTGTTATGTTCTCTCTCATATGTATAAAACAT GATAGTTTGCTTTTAAATGTAACAATGTAATTTAATTTCCTTATATATAAAAAATATACAAAGTGTCTAATCCCAAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_189065;
• Additional information: details;

Expression of Ll_transcript_398150

FPKM

• PAB: 7.6
• PNAB: 8.4
• PS1: 6
• PS2: 4
• PS3: 6.5
• PW1: 8.2
• PW2: 8.1
• PW3: 9.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398150

• Blastp: Uncharacterized protein sll0005 from Synechocystis with 37.88% of identity
• Blastx: Uncharacterized protein sll0005 from Synechocystis with 37.88% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (sll0005)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427497.1)
• Pfam: ABC1 family (PF03109.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;