| Id Trinity | TRINITY_DN51978_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_398146 |
| Sequence | CCCCACACGTGACCTTACCATAAAAAACACATCACACTCTCTTCCCCAAATCGTCAAATTCATTTCTCAGATTTCAGATTCCAATCATCGCCATTCAAAT CCCACTCCAATGAGCACACCTGCACTTTCAGGGGTTTCTGGTCCCTTCTCTGGGATCACTAAGCTTTGTAAGGGACTCGTTGTGGTTCTGATTTCTGGTC ACATTTTGGTTCAGCTTTTTCCTTCAGTTGTTACCTATCTTGCCCTCATTCCTGCAAGGACAATCCCATTTGCCTGGAATCTCATTACAGCCGGTTACAT TGAACAATCTGTATATGGGGTAGTTGTTAGCACATTCGGTCTCTTGTTTATTGGGAAGCTGCTTCAACCAATATGGGGTTCCAAGGAATTCTTGAAGTTC ATCTTTGTGGTTAACTTTCTAACTTCTGTGTGTTTATTCATCACTGCTATTGCCTTATACTACATTTCAAGGCAGGAGATTTACCTTTACATGCCACTTT CTGGATTTCATGGAGTTATATCTGGTTTCTTGGTTGGTATCAAGCAAATTATACCAGATCAAGAGCTTCCTTTGATCAAGATAAAGACAAAGTGGTTGCC ATCTATTGCCATATTGCTTTGCGTTGCTATTAGCTTCTGGAGACTAGAGGCTGCAGCGTATCTTCCAACCATAATATCTGGCACATATATAAGTTGGATT TACCTTAGATACTGGCAGACAAAACCAGAAACAAAATTGAGGGGTGACCCGAGTGAGGATTTTGCATTCTCAACATTTTTCCCAGAATTTTTAAGACCGG TTATAGACCCTATTGCATCAATATTTCACCGAATTCTCTGTGGAAGATCCGATGCTTCTAATGACGCTCATGGTTACACTCTTGGAAGTGAAGCTTTGCC CGGTTCTGACTCAATTGAGGCATCCAGGAGACGGTAATTTCACAGTGCTACTGTTTAGTCTTAATCAGATCTGGTGACATATTGTCAAACAGAAATATCT TGTTTGAACTTTGACATGACAATCAAATAAATAAACATTAAAGAGATGGAGGTCTATAACCAACTTTTGCATTTTTGGTGGCTTTACTAGCTTTGTTGGT TTTCATTTCTATAAAATGAAAACCGTTTTTATTTTCAACTTTCTAGTTTCTGGTTTATTCTTCTCCTCTACATAAGATAATACATAATCCAATATAAGAA ATTAGAAGTAAACACTTGTGTTGTGTATATTAATTCTTCAACTACTTTTTCATGGTTGTGAGATTATAGTTGTTCAGATCTTTTCTTTAGCTTTGAAGTA GTGAGATAATAGTTGTACTTGCAATAGATTCATTTATTAGGTAGGAAGGTTCTCTATAAGCTTATTCCATGTGCTATTGCAACACAAACTAAAGCAGGCA TAAAATTGAGAGAAAAGGTGGTGGACTATTGATTAAGATTCTTTTATTCTTTTTGTCGAAAACTTCATTCCATGACCAAGTGTTGTCAAATGATAGTTTT GTTCCTATTCTGCACAAAGTATTTTACAATCTACTCTTCCTGTTCTTGCATAGAACGAGGTGCTCGAGCTCTGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_189066; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_398146
| Blastp | Rhomboid-like protein 19 from Arabidopsis with 69.45% of identity |
|---|---|
| Blastx | Rhomboid-like protein 19 from Arabidopsis with 69.45% of identity |
| Eggnog | Transmembrane protein 115(ENOG410XQM0) |
| Kegg | Link to kegg annotations (AT3G07950) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414103.1) |
| Pfam | Eukaryotic integral membrane protein (DUF1751) (PF08551.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |