Ll_transcript_398164

• Id Trinity: TRINITY_DN51978_c0_g2_i7
• Name Transcript: Ll_transcript_398164
• Sequence: CCCCACACGTGACCTTACCATAAAAAACACATCACACTCTCTTCCCCAAATCGTCAAATTCATTTCTCAGATTTCAGATTCCAATCATCGCCATTCAAAT CCCACTCCAATGAGCACACCTGCACTTTCAGGGGTTTCTGGTCCCTTCTCTGGGATCACTAAGCTTTGTAAGGGACTCGTTGTGGTTCTGATTTCTGGTC ACATTTTGGTTCAGCTTTTTCCTTCAGTTGTTACCTATCTTGCCCTCATTCCTGCAAGGACAATCCCATTTGCCTGGAATCTCATTACAGCCGGTTACAT TGAACAATCTGTATATGGGGTAGTTGTTAGCACATTCGGTCTCTTGTTTATTGGGAAGCTGCTTCAACCAATATGGGGTTCCAAGGAATTCTTGAAGTTC ATCTTTGTGGTTAACTTTCTAACTTCTGTGTGTTTATTCATCACTGCTATTGCCTTATACTACATTTCAAGGCAGGAGATTTACCTGTAAGTATATAAAA TAAATCAATTAGCACCTTAGATGATATTTCCCGTCTGTTGCTCATGCTGTTTTCTGTTGTATTTTTTTCTTCCGTTAATTAGATTTCCCTCTTTCGTACA CTTTTACTGCTGTTCGGGTTTCCATTTTTTGCAGCCATGGAAGCCCATTTGAAGCTGGATTACTTATGCCCTTTTAACTTCAACTGTTTAACATATACAA AACATGTTGGTTCAGTATTTAAGCTAAAGCTTTTGTTTATTTAAAATTGAAATGAAAGTATTGTTTTGGCCCTCAGACTTTTCAAGTTACTTGTTTTCTA TGCTGCATGTTTAATCTTAAACGATATTCTATTTTCAATTTCTATCTGGAGCTTTCTTTGATCTTTATATTCACTATTATTCTAGTTACATGCCACTTTC TGGATTTCATGGAGTTATATCTGGTTTCTTGGTTGGTATCAAGCAAATTATACCAGATCAAGAGCTTCCTTTGATCAAGATAAAGACAAAGTGGTTGCCA TCTATTGCCATATTGCTTTGCGTTGCTATTAGCTTCTGGAGACTAGAGGCTGCAGCGTATCTTCCAACCATAATATCTGGCACATATATAAGTTGGATTT ACCTTAGATACTGGCAGACAAAACCAGAAACAAAATTGAGGGGTGACCCGAGTGAGGATTTTGCATTCTCAACATTTTTCCCAGAATTTTTAAGACCGGT TATAGACCCTATTGCATCAATATTTCACCGAATTCTCTGTGGAAGATCCGATGCTTCTAATGACGCTCATGGTTACACTCTTGGAAGTGAAGCTTTGCCC GGTTCTGACTCAATTGAGGCATCCAGGAGACGAGAACGAGGTGCTCGAGCTCTGGAAGAAAGATTGGCGGCCGAGAGGTTGGCTGCTGCACGCAGCGAGT TGCAAAGAGATGCTTCGGAAAATGTATGATTCCTCAGCTTTTGTAAATTCAGATCAGCCCAGCCAATATGGAACTACTATGAGTGGCATTTTTAGAGGTG GTACAATACTCAAGAAATTTTGTCTAGGTTAAGGAGGATTTTAATTTGGACTATGATCTTTGTGAAGCTAAAAGTTTCTCTTTCTTTTGTCTGATCAATG CAATTCAATTACATGTGTACTTAGCCAAATATATGGAATCTTTAAGAATTATTGTTATTGTTACCTAAGAGCAAGACTAAGGGTGTGTTTGGGTTTGCAA ATCTGAGTTTTGATAAAACTAAGTTTGATGAACTGAAATTATGTTTGATACTTATGATTAAAAGTATTTTTGATAGAATGAATGTTGTTTATTGCCCG
• Tissue: pods
• Gene name: LI_gene_189066;
• Additional information: details;

Expression of Ll_transcript_398164

FPKM

• PAB: 0.1
• PNAB: 0.7
• PS1: 0
• PS2: 0.5
• PS3: 0.5
• PW1: 0.3
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398164

• Blastp: Rhomboid-like protein 19 from Arabidopsis with 69.61% of identity
• Blastx: Rhomboid-like protein 19 from Arabidopsis with 69.72% of identity
• Eggnog: Transmembrane protein 115(ENOG410XQM0)
• Kegg: Link to kegg annotations (AT3G07950)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414103.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;