Ll_transcript_398934

• Id Trinity: TRINITY_DN51984_c0_g1_i10
• Name Transcript: Ll_transcript_398934
• Sequence: TAATAAAGGAAATAATATTCATCTACATTCCCAACAATTTCATTTTATTTGGCACAAATCGCAAAAATGAAAACTTAGAAAGACCCGCAGAGAGAATTAC AAGAAAAAAAAGAGCAAAACTTTTGTTTTTGATTCTGGATTCTAAATTCTCATAGATTTGTTATTGTCCGTACAGTTCCTGGGTCATTATTTTCTCCGAA ATTTCATACATTTTCGTCGCAAATGTTTTTACTCGTAAATTTCGTTCCTTGATCGCAATTAATCAGCAGTGGCAAGGATCTGGCATACTAATGCTTCTGG TAAATTAATGAGTTATATACGTTCATGCTATGGTGAAGAGACCAGATTATGGATTCAGGGTCTTTCAGGTCCCCCCTACAGCTAGACGTCCTAGATCTAC AAGAAGGTGGGGTCATTCCGAGAAATCACCCGAGGACGGCCAAGCTTGTGCTTTTGAATTGCTGGCATCTTTAGCTGGCAAGTTGTTACAGGAGAGTGAA AGTTCTGCTTCTAGCAATGCAATTGAAGGAAATCATCACCATGCCTTTAGCCACAGTGTTGTTGAGAAGGAAAGGCAAGGTGAAGTTAGTCCGTTAATTG CAAAAGGAGTCCATAATGGAAGTTGTGCAGAGAGTATTTTATTTACTGAGATGGAATCACAAAAGAGTAATCAGAAATGTCTTGAACATGCTCAGAATGA CTGTATAGTACAATGTGTTTCAGTTAATAATAATAGTAATTCAGAGTGTTGGGAAAAATTTGAAGCTGGTTTGATGTCCAAAAATTGCAAATGCGGGAAT AAGTTTGTGCATCATTCTAATAGATTAGTAGAAATACCTGAAGATGTTAGGGAGTCTTCTGATGCTAATGTAAAGAATGGATTTAGGCGGGAACAGGTGG TTAGCAATTCAGGCTTCAAGGGACTGCCTTTGGGTAACAAATTTTGTTTGAAAGACCCATTGGAATTGTCTGCTAACTCTCCTGCACTAATTAACCCAAA CAGTAAGGTTAGATCTCCATTTTGTGGGGATATGTTTCTCAATGCTTCAATTTCCAGGCATGGGAATAATAATAAGTTAGGCTTTAGAGATGATGACGAA AACTTTTTAAGGTACAAGAGAGTTTGCACCAAATCAAAGGCTTTAAGGCCTCCACAACGCGTTGCACGCCGAAGAATCAAGCAGCTGCTGACTTCCAAAC GCGGGAAGGTAGCTCCAAAGTTGAAGGATTGTGAACATTCTAGAACTGAGTTTGCAGATGAGGGAGTAAAACCCCTGTATCATAAGAGGAAGGCTTGTTA TTATAGTTTTGAAAGATCTCGGCATAGCACTCTTTTCAAGAGGAGGAAATTCTTTGGCCGTAGTTCAGTGTTAACTTCTGATGGAGGATTCAGCTGTGAT AGTGTATCTAATTCACCAGATAAAGGAATTGATGGAGACAGCTCTAATTCATCTGCAAAACTGCAAGCCTCTAAGGATTCTCATTGTAATTAATTGTGTG GTGTTCATTAATTTCTGTTAGCTTGATTGTTCATCAACCTTTTAGGAATTAATGTTTTGTGTATGCCTCATGTCCAGTGAAATTTAGCATCAAGTCTTTC AGGATACCAGAACTTTACATTGAGGTCCCAAGAACTTCAACTGTTGCCTCATTAAAGAGGGCAGTCAAGGAGGCTGTGATGGGAATGCTTAGAGGTGGAA TGCATGTTGGTGTTCTTCTTCAGGGAAAAAAGGTTAGAGGTAACAACAGAACTCTTGGGCAGACTGGTATATCTCGTGAAGAAAACCTGGATAAACTTGG TTTCGTGTTGGAGCCCAGTTCTCTGCAAGCTTCTCCAGCTGTTTGTGTTGGTGAGCCTTCTCAATGCAAAACACCTCAACCTACCAGGTCCCCAGAAGCT CATGTTCTAGATTCAGGGATTACTGATGCCTTACCGGACTCCCCCTTTCTGACAAACGCGAGCAACCTTGTTGAAAGTAATCACGAGTCAACATCTATCT CCACTGACACTATAGTTGACAAAATAACAACAGATGCCAGAGCACTAGTTACTGTTCCAACTAGGAGCACAAAAGCATTAGCTGTGGTTCCTGCTAGTCA GAAAACCAGGCACTCTGAGCTTGTACAGCGTCGAACCAGGAGACCATTCTCCGTGTCTGAAGTAGAAGGACTTGTTGAGGCCGTTGAGGAACTTGGAACC GGAAGATGGCGTGATGTAAAGTTGCGAGCTTTTGTGAATGCAAACCATCGGACTTATGTAGACTTGAAGGATAAATGGAAAACATTAGTGCACACTGCAA AAATCGCCCCTCAACAGCGGAGAGGAGAGC
• Tissue: pods
• Gene name: LI_gene_189106;
• Additional information: details;

Expression of Ll_transcript_398934

FPKM

• PAB: 0.7
• PNAB: 0.5
• PS1: 2.6
• PS2: 0.3
• PS3: 0.4
• PW1: 0.7
• PW2: 1.9
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_398934

• Blastp: Telomere repeat-binding protein 3 from Arabidopsis with 32.31% of identity
• Blastx: Telomere repeat-binding protein 4 from Arabidopsis with 57.2% of identity
• Eggnog: Telomere repeat-binding protein(ENOG4111C5T)
• Kegg: Link to kegg annotations (AT3G12560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460819.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;