Id Trinity | TRINITY_DN51984_c0_g1_i20 |
---|---|
Name Transcript | Ll_transcript_398946 |
Sequence | TAATAAAGGAAATAATATTCATCTACATTCCCAACAATTTCATTTTATTTGGCACAAATCGCAAAAATGAAAACTTAGAAAGACCCGCAGAGAGAATTAC AAGAAAAAAAAGAGCAAAACTTTTGTTTTTGATTCTGGATTCTAAATTCTCATAGATTTGTTATTGTCCGTACAGTTCCTGGGTCATTATTTTCTCCGAA ATTTCATACATTTTCGTCGCAAATGTTTTTACTCGTAAATTTCGTTCCTTGATCGCAATTAATCAGGTGAGTTACTCATTCAGATCTTTGCACGTTAAAG TTTCTGAATTTCGTCTTTGTTCCTTCGATCTCGTGGTTTGTGCTAAATCTGCACGGATATATCTCGTTGAATTTCCGATGCAGAATTATTGTATCTTGTA CGCAATTTTTCTCTTTAAAGTTTAAATCTTTTCCCTGAAAAGTTTGGGTTTTGGGATTGGGAAATTGAGATCCGATCGTGGAAGTTAGGCCTTGTTTGAC ATAAGCAACTGGGGTTTCGATTCATTTCAATTCTAAAGTTTTGATTCATCAAATTTCCTTTTTTTCTAGTTGCTGAGATTTCAGTGTTGCTGTATGTGCA GTTTTGTGTAGTTATATGTCATGTATCCTAATTCCTAATAAGAGCCACACATTCTTGAATCAACATGGTACTTTTTGTGTTGTTTTAAATCTTCTTATTT GTTGTTTATGTCATCATTTTAGGCAAAAAACTGTAATATACTATAACAGCTGGATGATTTTTATGACTGATTTTGTTGTCTGGATTCTATATTTAGTTTT TTCCCAATGATTTTACTCACCTTCTATGGCAAATTAATATTGTATATTTTTAATTTTCCTTTTGCTTCAACAAGTCTTAATTGTCTCCTCTAAATATATG TAGATCGAATTTTCCCTTCTAAGGTGAACCTTGATTACTCAAGTAGCATGCATTTTGTTGTTGTTGTTGAATAGTAGTAGTTTATGAGGACCCCAGATTC CAGAACTGTTTGGCATACAGAGTTGTTTGGTTTTTTAACAAGTCAATCTTCCTATGAAATTTGAAATTGTTGAACATATCATATGATTATAGTCTGAGTC ATACTAAAATGTTGGATTTCTTTCTTACAAGATGTAGCGAAGTTCTAATGATATACTTGATATATGGGTCTCCCTTCATTTTTATAGCAGTGGCAAGGAT CTGGCATACTAATGCTTCTGGTAAATTAATGAGTTATATACGTTCATGCTATGGTGAAGAGACCAGATTATGGATTCAGGGTCTTTCAGGTCCCCCCTAC AGCTAGACGTCCTAGATCTACAAGAAGGTGGGGTCATTCCGAGAAATCACCCGAGGACGGCCAAGCTTGTGCTTTTGAATTGCTGGCATCTTTAGCTGGC AAGTTGTTACAGGAGAGTGAAAGTTCTGCTTCTAGCAATGCAATTGAAGGAAATCATCACCATGCCTTTAGCCACAGTGTTGTTGAGAAGGAAAGGCAAG GTGAAGTTAGTCCGTTAATTGCAAAAGGAGTCCATAATGGAAGTTGTGCAGAGAGTATTTTATTTACTGAGATGGAATCACAAAAGAGTAATCAGAAATG TCTTGAACATGCTCAGAATGACTGTATAGTACAATGTGTTTCAGTTAATAATAATAGTAATTCAGAGTGTTGGGAAAAATTTGAAGCTGGTTTGATGTCC AAAAATTGCAAATGCGGGAATAAGTTTGTGCATCATTCTAATAGATTAGTAGAAATACCTGAAGATGTTAGGGAGTCTTCTGATGCTAATGTAAAGAATG GATTTAGGCGGGAACAGGTGGTTAGCAATTCAGGCTTCAAGGGACTGCCTTTGGGTAACAAATTTTGTTTGAAAGACCCATTGGAATTGTCTGCTAACTC TCCTGCACTAATTAACCCAAACAGTAAGGTTAGATCTCCATTTTGTGGGGATATGTTTCTCAATGCTTCAATTTCCAGGCATGGGAATAATAATAAGTTA GGCTTTAGAGATGATGACGAAAACTTTTTAAGGTACAAGAGAGTTTGCACCAAATCAAAGGCTTTAAGGCCTCCACAACGCGTTGCACGCCGAAGAATCA AGCAGCTGCTGACTTCCAAACGCGGGAAGGTAGCTCCAAAGTTGAAGGATTGTGAACATTCTAGAACTGAGTTTGCAGATGAGGGAGTAAAACCCCTGTA TCATAAGAGGAAGGCTTGTTATTATAGTTTTGAAAGATCTCGGCATAGCACTCTTTTCAAGAGGAGGAAATTCTTTGGCCGTAGTTCAGTGTTAACTTCT GATGGAGGATTCAGCTGTGATAGTGTATCTAATTCACCAGATAAAGGAATTGATGGAGACAGCTCTAATTCATCTGCAAAACTGCAAGCCTCTAAGGATT CTCATTTGAAATTTAGCATCAAGTCTTTCAGGATACCAGAACTTTACATTGAGGTCCCAAGAACTTCAACTGTTGCCTCATTAAAGAGGGCAGTCAAGGA GGCTGTGATGGGAATGCTTAGAGGTGGAATGCATGTTGGTGTTCTTCTTCAGGGAAAAAAGGTTAGAGGTAACAACAGAACTCTTGGGCAGACTGGTATA TCTCGTGAAGAAAACCTGGATAAACTTGGTTTCGTGTTGGAGCCCAGTTCTCTGCAAGCTTCTCCAGCTGTTTGTGTTGGTGAGCCTTCTCAATGCAAAA CACCTCAACCTACCAGGTCCCCAGAAGCTCATGTTCTAGATTCAGGGATTACTGATGCCTTACCGGACTCCCCCTTTCTGACAAACGCGAGCAACCTTGT TGAAAGTAATCACGAGTCAACATCTATCTCCACTGACACTATAGTTGACAAAATAACAACAGATGCCAGAGCACTAGTTACTGTTCCAACTAGGAGCACA AAAGCATTAGCTGTGGTTCCTGCTAGTCAGAAAACCAGGCACTCTGAGCTTGTACAGCGTCGAACCAGGAGACCATTCTCCGTGTCTGAAGTAGAAGGAC TTGTTGAGGCCGTTGAGGAACTTGGAACCGGAAGATGGCGTGATGTAAAGTTGCGAGCTTTTGTGAATGCAAACCATCGGACTTATGTAGACTTGAAGGA TAAATGGAAAACATTAGTGCACACTGCAAAAATCGCCCCTCAACAGCGGAGAGGAGAGC BLAST |
Tissue | pods |
Gene name | LI_gene_189106; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_398946
Blastp | Telomere repeat-binding protein 3 from Arabidopsis with 42% of identity |
---|---|
Blastx | Telomere repeat-binding protein 3 from Arabidopsis with 49.02% of identity |
Eggnog | Telomere repeat-binding protein(ENOG4111C5T) |
Kegg | Link to kegg annotations (AT3G12560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460819.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |