Id Trinity | TRINITY_DN51984_c0_g1_i25 |
---|---|
Name Transcript | Ll_transcript_398955 |
Sequence | AAAAAATATAGAGGGTTTAAGGGCACTGTTGCGTGGTTTTTGTTATTGGTATTGGTGTGTTTTTGTCCTTTTCAAAAACTCTTCTATCTTCTATTCTCTT CTTCTTCCATCTAACAAAAACAAAAACAAAAAAAGAAGAATAATGAAATTTTTACCATATTGAAAGAGAGAGAAAAACAGAAAGTTCATAACTTTGGTGA TTTAAGATTGTCAATTCCCTTTAGATCTCTTGCATTTTCAGACATAAACTCACCCAAGTTTCTACATTTTCATGGGTTTCTCCGAAAACTTCGTTTCTTG ATCATAATCTGCTTCTTATGATCGTTGCTCGAATGTGTTTTTTGAAACAGTGACCAGGATCTGGTGTACTTATGCTTTTGGTTATTTGCTGAGCTTTCTA TATTTAAGCTATGGTGTTAAAGAAGAGGCTAGATCATGGATTCAATGGCTTTCAAGCGCCCTTTATACCTCGAGGTCCTAGATCTGCAAGAAGGAGTTGC TATTCCAAGAAATCGGTTGAGGATGGTCAAGCTTGTGCCTTCGAACTATTGGCATCTTTAGCTGGCAAGTTACTGGAGGAGAGTGAAAGTTCTGCTTCTA GCAATGCATCTGAAGGAAATCATCTCGTTAATGATCGAGATAAACAAGATGAGGTTAGAGCAGTAATAGCAGAAGGAATTCATCCGGGAAGTTGTGCGGA GAGTAATTTTATAACTGATGTGCCCTCACAAAATAGTAGTCAGAAATCTCTTCTGCGTGCCAAGAATGATTTGGTAATAGGACGCAATTCTGATGTGAAG GTTGAAGCTTTCGAATGGGAGAACAAAATTGGGCGTTGTTCTAATAGTTATAATAATAAATTAGTAGAAGCAGCCGGATATTTTCGGGGATCTTATGATG GCAATGTAAAAAATGGATTTATACAGGAACGGGAGGCTGGCAGTTCTGGCTTCCAGAGATCAACTTTGGCAGATAAATTTAGTTTGAAGGACCAATTAGA GTTGTGTGGCTCTCCCGCACTAATTGACTCAAACAGTAATGTTAAATCTCCATATTGTAGTGAATCCTTTCCCAGCGCTTCATTTTCCAAGCATGGGAAT GATACTAAGTTAGGTTTTAGAGATGATGACGAAAACTTTTTAAGGCGCAATGGAGTTCGCACCAAGTCAAAGGCTTTTAGGCCTCCACAACACATTGCAT GCCGAAGAATCAGGCAGATGCTGACTTCCAAACACCGGAAGGTTACTCCAAATTTGAAGTATTATGGGCATTCTAGAACTGATGAGGGTGTAAAACCCCT GTATCGTAAGAGGAAGACTTGTTATAGTTTTGAAAGATCTCGGCATAGCACTCTTTTCAAGAGGAGGAAATTCTTTGGCCGTAGTTCAGTGTTAACTTCT GATGGAGGATTCAGCTGTGATAGTGTATCTAATTCACCAGATAAAGGAATGGGTGGAGACAACCATAACTCATCTGCAAAAATGCATGTATCTAAAGATT CTCATGTGAAGTTTAGCGTAAAGTCTTTCAGGATACCGGAACTTTATATTGAGGTGCCTAAAACTGCAACTGTTGGCTCATTAAAGAGGACAGTCAAGGA GGCAATAATGGCAATGCTCGGAGGTGGACTGCATGTTGGTGTTCTTCTTCATGGGAAAAAGGTTAGAGATGACAAAAGAACTCTTCGGCAGAGTGGTATT TCTTGTGAAGAAAGTCTGGATAAACTCGGTTTCATGCTGGAGCCCAGTTCCATGCAAGCTTCTCCATCAGTTTGTGTTGGTGATGCATCTCCATGCAAAA CTTCTCAGCGTGTCAGGTCCCCAGAAACGCCTGTGTTAGATTCAGGGATTACCAATGCCTTACATGACTCCTCTTTGCTGACAAATAATGTGAACCTTGT TGAAAGTAATCATGACTCAAATTCTTTCTCCACTGACCCTATAGCTGACAAAATAGCAACAGATTCCAGAGCGCTAGTTACTGTTCCAACTAGGAGCACA GAAGCATTAGCTGTGGTTCCCGTGGGTCAGAAAACCAGACACTCTGAGCTTGTACAGCGTCGAACCAGGAGACCATTCTCTGTTTCCGAAGTAGAAGCAC TTGTTGAGGCAGTTGAGGAACTTGGAACCGGAAGGTGGCGTGATGTAAAGTTGCAAGCTTTTGAGAATGCAGACTATAGGACTTATGTTGACTTGAAGGT ACTCTCCTTTATAATCTTAGACACAGTTTTATTTTTCTATAGGAGTTACTTTTTTTGACATGACCTAGAAGGGTTATTACTTATTACTAGTAAAATAATG CGGAGTAGGAATCCAACTTTTTTGTTTAATTCATGCTTCCAGTTTGATTCTACTAAACTCCTTCATTGTACATAGATTACTATCATTAATTCAATGAGTT CAGATCAAATTATATATTGAGGTTACAAATTTAAAGGATCTTATATGTTTGATAACATAAATCACGTTCCGTTTATAATAATTAAGAGAATGTTGCAGCT GCTATACTGTTTATATATACTGCATGATTTGGCCTATTTGTGTGTGCAGGATAAATGGAAAACATTAGTGCACACAGCAAAAATCTCTTCTCAACAGAGA AGAGGACAGCCAGTCCCTCAGGTTCTCTTGGACCGAGTCTTAGCTTCCCATGCTTACTGGTCTCACCACCAAGCCAAGCATCATGCCAAGCAGCACCAAA TTGGAACCATGAAAAACACTGTTGATTGCATCCAACCACATGTGATGAATGATGTAGAAAGGAAATTATGTTGTTAACTTGCAACTGTGGAAACACAAAC TTGTACATATTGTGATTCAATTTCAGTAACATTTTCACAACAAATTGGTTGACAACCTGTAGTTTCATGTAGGTTGGCAATTTGTAAATGATTTCAAGGA ATAAGGTTGTTGTAACAGTTACTTTTGTTCTTTGTTTTTTTATAAATACAATTTCATGAAAGTGTACAAATGTTAAAAGAACCTGACATCATAACAGAGA AAAAGGAAAATGTTCACCTTGTTGTTTCCAGTTTCATGTTTCTTTCTTATTTGGTGCATTTTTCTCATTAG BLAST |
Tissue | pods |
Gene name | LI_gene_189106; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_398955
Blastp | Telomere repeat-binding protein 3 from Arabidopsis with 43.38% of identity |
---|---|
Blastx | Telomere repeat-binding protein 3 from Arabidopsis with 48.41% of identity |
Eggnog | Telomere repeat-binding protein(ENOG4111C5T) |
Kegg | Link to kegg annotations (AT3G12560) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419676.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |