Ll_transcript_399167

Id TrinityTRINITY_DN51985_c0_g1_i2
Name TranscriptLl_transcript_399167
SequenceGAAGAAAAATCCATAAACACGCGTGATCTAAAATAACATAAGCGAATGAGGAAGGAGTGACTTGCAATCTTCTTCTTTCTTCTTAATTCTTATTCTTCCA TTACATCATCAAAGTCAGAGAGATTAAAAAGACCAAATTGACCCCCTTGGATCATCCTCTCTCTTCATTCACCATGAACCAAAAGGCCAACGTTTCTAAA GAGCTCAACGCCAAACACAAAAAGATATTGGAAGGGCTTCTAAAATTACCCGAGAATAAGGAATGTGCTGACTGCAAAGCTAAAGGTCCAAGATGGGCTA GTGTCAATCTTGGCATCTTTATTTGCATGCAATGTTCAGGCATACATCGAAGTCTTGGGGTACACATATCAAAGGTTCGCTCTGCAACTTTGGACACTTG GCTCCCAGAGCAGGTTGCTTTCATTCAATCAATGGGAAATAAGAAAGCAAATAATTACTGGGAAGCAGAATTACCTCCACATTATGATAGAGTTGGAATC GAAAACTTCATTCGTGCAAAGTATGAAGATAAAAGATGGGTTGCAAGGGATGGGAGGCCAGCATCACCTTCTAAACTGCAAGAAGAAAACGCTCCTTCAC ATTGGCAGAGGCCTGTGGAAAGAGTTGGTCACAGTTATGGAGCTACATCTGAAAAGACTTTTGTGGAAAGGAAGAAAATTCAATCAAATGCAATTCCTGG TATAAGAATTAGTGTTCCTGCCCCTCCCAAAGGACCTGAGCAGGCAACACCTGTGACAAAACCTCAGCATGTTGAGAATGTGAAACCCATGGCAGCACAG CCGCAAGCTGAAACTTTAAAGCACACTACTGGATCAGATCAAAATGCCATTCCTAAATTTGACTTTGCTACAGACCTTTTTGACATGTTGTCTGTGGATG GTCCAAGTGAAAAGGGCTCAGATGCAGCTGGTGCTACTGCTGATGATAATAACTGGGCAGAATTTCAGTCTGCTGCTGAGGAATCAACAGCTGAGAAGAC AAATACCCCGAGTACAGTTGAGAGTACACCCCAGTCTACTTCTGGAATTGAGGATCTATTTAAAGATTCACCTTCTGTCACCCCAAGCTTAGCTCCAGAA AAACCACAAAAAGATATAAAAAATGATATCATGAGCCTCTTTGAGAAGGTATGTGCCACTGCCAATGCTTCAATAGGTTTGTTAAAGATGTGTAGTTCCT TCCTTGATTTGACATACTTACTCTTATTTATTGAATATAGAAATACAAATTTCTGCGTTGTTATTTGGGCTTCCTATTTTTTCCTATATATGAGTTATTA TTATCCAAGACATCGAGTGAGTTTGGTTATTACCCTTATGCCTTATCCTCAGATGGTTATTTTGTTTTGCTATGTGAATGTCATTTTACCTGACCCAGTA AAATGGATATCTGCAGACCAATATGGTATCTCCATTTGCTATGCATCAACAGCAGCTAGCCATGCTGGCACAGCAACAGTCCCTTCTAATGGCTGCCGCA GCCAAATCTTCCGGTGGGGATCCCAAGCATCCTTCTAGTGTACAACAACATCAGCATCAGCTGGCCATGCTGGCACAACAACAGTCTTTTCTAATGGCTG CAACAGCTAAGTCTGCTGCTGGGGATCCTAAGTATCCTGCAAGTGTGCAACAATCTGGGTCCAAGATTCCTGTCCAAAGTTGGCCAGCTGCTGGTTACCC AATTCCTGGAGTAGTACCCATGGGTGGTCAGGGTCAGGGAGAGTTGCACAATCTCATGCAGACGATGAACATGAATGGAGCGCATCCAGCAGCGAGCTCA GTTCAATATCCACCTTCTAGTTTCTATCCGATGGGGCAAGTTGCTCCAGTTAATGGGACATCGACAATGGGAGTGAGTAAACCCCAATCTGCAGCTCCGG TATCATCAACCACTTCACAGAAAGGGAAGGATTATGATTTTTCCTCCTTAACACAAGGAATGTTTGGGAAACAATGATTGGCCTTTTGTTCAAGTGTCAT ATAATAACCATAGAACATTAGTTGAAATTACAGAAAGGGAGAGATTATTTTTCCTTTACCCTTGACCTTTCCTTCGGTTCTAAGCCATTTATAGAGAGCT ATTGAGAAGTTTAGTGTCTTCCTCCTTTCGGGTTATCGCCTCATTTGAATGGATATTATATGTGATTTAACAATTGGTTAATGGTATTAATTGTTTATTC CTTCTACGTGTATATCTTCCACAAACTTTCCCAAAATAAGTTATGTAGTAGTATCTGGGTAAATAATTTATTTTATTCAACTGACTTTTCTTATTATTGC TTTCAAGTAACTCAAAAAAGACGAG BLAST
Tissuepods
Gene nameLI_gene_189111; 
Additional informationdetails; 

Expression of Ll_transcript_399167

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_399167

BlastpProbable ADP-ribosylation factor GTPase-activating protein AGD5 from Arabidopsis with 59.17% of identity
BlastxProbable ADP-ribosylation factor GTPase-activating protein AGD5 from Arabidopsis with 59.17% of identity
Eggnogdomain, ankyrin repeat and PH domain(COG5347)
KeggLink to kegg annotations (AT5G54310)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019453612.1)
PfamPutative GTPase activating protein for Arf (PF01412.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;