| Id Trinity | TRINITY_DN51993_c1_g8_i3 |
|---|---|
| Name Transcript | Ll_transcript_396994 |
| Sequence | CAAAATTCAGTGACAAGAAGTATAAAGAAGCAGTGAGGCCTAGCCTTATATTTCTAAACCAAAACTTCTCTCACTCTTTTCAAACTCTTACCTTAGTTCT AGGTTCTTCTGATCACAAGAGGAATTAACACCAACTTTCTAAGTTCATCTAATCTTAGAAAGATATCAGTGTTGGGGTAGTGGTGTTTGGAGTGAAAAAC AGAAGAAAAAAGTGTGGTTTGTGAAGAAAAGGTTAGTGTAACAAAAAGGGTGGTGTGGGGTGGTTTTAGACAAGTGATGCGCTCAGGAGTTTGTACATTG CAGCAGACCCTCACAGCTGAGGCTGCTTCAATCTTGAAGCACTCTCTTGTGTTGGCGCGCCGTAGGGGCCATGCACAGGTCACCCCTCTGCATGTTGCAG CCATATTGCTGAGCTTAAGGGCAAGTAGTCCCTTCAAGAGGGCATGTCTGAAATCTCAGGCACAGTTTCAAACTTCATCACACCCTCTTCATTGCAGAGC TCTTGAGCTTTGCTTCAATGTTGCACTCAACAGGCTTCCAACAACACAAGGTCCTAGTTTTCTACACAATCAACCTTCTCTTTCCAATGCTCTCATTGCT GCACTCAAAAGAGCACAGGCACACCAGAAAAGAGGGTGCATAGAACAACAACAACAACCACTTCTCATTGTAAAAGTGGAGTTAGAACAACTCATCCTAT CTATTCTTGATGACCCTAGTGTTAGCAGGGTTATGAGAGAAGCTGGTTTCTCTAGCACTGATGTGAAGAACAACATAGAAGATAACAAAACTTCAACAGC AACAACATTAACAACTTCTGTTTTTTACAACAATTCTGGTGGTGGTGTTTTCTCTTCTCCTTGTTCACCTAGTGAAAACCAAAAAAATCAGCTTTTTTTG GGTTCTTACACCAACTCTCATGAGTATAGTACACCATTGATGTTTCCCATCACTCATGAAGAAGATGTGAAGGTGGTTTTAGATATTCTTTTAGGTAAGA ATAAGAAAAAGAATACTGTGATAGTTGGTGACTCTTTATCATTAAATGAAGGCCTTGTAGAAGAGATAATGAGAAAATTTGAAAGAGGAGAAGTACCTAA TGAGTTGAAGACAACAAATTTTATCAAGTTTCAATTTTCTTCTTTGAGGTTCATGAATAAAGATGAAGTGAAAATGAACCTTTCATCACTGAAAAAGAAG GTAGATTTTGTTATATCAAGTGAAAGGGGTGCTATATTTTATGTTGGAGATTTGAAGTGGATATTGGAGGGAATTAGTTTGTGTGAGAAAGAGGGTGGTT GGGGTAGTTATAACAGTGTTGATGATGTAGTTGAAGAAATAGGGAAATTGTTTTGTGGTTTGGGAGATTCAAACACTAGTAAGGTGTGTCTTATGGGGAC AGCAAGTTATCAAACATACATGAGATGTCAAATGAGACAACCTCCTCTTGAGACTCAGTGGAATCTTCAGGCTGTTCCTGTTCCATCTGGTGGACTTGGC TTGAGTCTTCATGCTTCAAGTGTCTATGATTCAAAGATGACCAACTCCCTCAACCAATCTCAAATGGTGGAAACAAAGCTGTTCAGCATGAAGGAGGAGC ATGATAAGCTGAATTGTTGTGAAGAATGTGGCTCAAATTATGAAAAAGAAGCTTTATTGTTCAAACCAGGCCATAAGAAACTATTGCCTTCATGGCTTCA GTCTCACTGCACTCAAGTCCATCATATGGTACAAAAATTTATGCCCTTTTTCCCTTCCTTATAGTACAAGATATGAATCTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_189193; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_396994
| Blastp | Protein SMAX1-LIKE 5 from Arabidopsis with 49.37% of identity |
|---|---|
| Blastx | Protein SMAX1-LIKE 5 from Arabidopsis with 47.95% of identity |
| Eggnog | ATP-dependent CLP protease ATP-binding subunit(COG0542) |
| Kegg | Link to kegg annotations (AT5G57130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416288.1) |
| Pfam | Clp amino terminal domain, pathogenicity island component (PF02861.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |