Ll_transcript_397115

• Id Trinity: TRINITY_DN51996_c0_g1_i6
• Name Transcript: Ll_transcript_397115
• Sequence: CACAATTCCAAATTCACTTTCCGCAAAACAAAAAAACAAAACACTCTTTCTCTCTTTCTTTCTCGACTCCGCGGCGTAGATCCGAGGAGTTTGTGAAACC CTAACTGTTCTCAACCAACTTTTTCATCTTCATCCGAAGTCATGGCAGCAGCAGCACCTGAGGGGTCACAGTTCGATGCTAAGCAATTTGATTCCAAGAT GAATGAGTTGCTTACATCCGATGGACAGGACTTCTTCACATCTTATGATGAGGTTCATGATAGTTTTGATGCTATGGGCTTGCAAGAAAATCTCCTGAGA GGCATTTATGCATATGGTTTCGAGAAGCCATCAGCTATTCAGCAAAGGGGAATAGTTCCATTCTGCAAGGGACTTGATGTTATACAGCAGGCTCAGTCTG GAACTGGGAAGACTGCAACATTCTGCTCTGGGGTTCTGCAGCAACTTGACTACGGTGTGACTGAATGCCAGGCCTTGGTTTTGGCACCAACCCGTGAGCT TGCTCAGCAGATTGAGAAGGTTATGCGGGCACTTGGAGACTATCTAGGTGTGAAGGTGCATGCTTGTGTGGGAGGTACCAGTGTTCGTGAAGACCAGCGC ATTCTATCAAGTGGTGTTCATGTTGTTGTTGGTACTCCTGGTCGTGTATTTGATATGCTGCGTAGACAGTCACTTAGGGCCGATTACATCAAGATGTTTG TATTGGATGAGGCTGATGAAATGCTTTCTCGGGGTTTTAAAGACCAGGTGCTTTTTAATTCACAACTTCTTTTGTCCAGTTTTTTTTAATTACTAACTTT TTTATCCTATGTTTGTTTGATATGCAATGCTTGGACATGTCTTTACTTTTTGTATCAATGCTAAAGTCATACTTTTATCCAATTTCATCAAATTTCTTCC TTAATTCCACTTTTTCCTTATTTATATCTCATTTTAAAATATTTTTGAAACTTCAACTCTGTTTCAATCACCAGATGTATGTTTCTGCTAGTAGTCATTA TACGAAAATGTGATAGTTATCTCCTCTGTACTATATTTTTGCTGTCCTATTGGTTTAATGCCCTAAATGAATTTATTTATGCGTACGTTGTTTAACCTTT CTTTTTTGTTGTTAGATCTATGATATATTCCAGCTGCTTCCATCCAAGATTCAGGTGGGAGTTTTCTCTGCTACCATGCCTCCAGAGGCTCTTGAGATCA CAAGGAAATTTATGAACAAACCTGTGAGGATCCTTGTGAAGCGTGACGAGCTTACCTTGGAAGGTATTAAGCAGTTTCATGTCAATGTCGAGAAAGAGGA GTGGAAGCTGGACACACTCTGTGATCTTTATGAGACATTGGCGATCACTCAGAGTGTCATTTTTGTTAACACCAGAAGGAAGGTCGATTGGCTTACTGAC AAGATGCGGAGCCGAGATCACACAGTCTCTGCAACCCATGGAGACATGGACCAGAATACCCGTGACATTATCATGCGTGAATTCCGTTCTGGGTCTTCCC GTGTTTTGATAACTACTGATCTTTTGGCTCGTGGTATCGATGTCCAGCAAGTGTCTCTAGTTATAAACTA
• Tissue: pods
• Gene name: LI_gene_189208;
• Additional information: details;

Expression of Ll_transcript_397115

FPKM

• PAB: 3.8
• PNAB: 8.2
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 3.2
• PW2: 0
• PW3: 3.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_397115

• Blastp: Eukaryotic initiation factor 4A-15 from Nicotiana with 90.95% of identity
• Blastx: Eukaryotic initiation factor 4A-15 from Nicotiana with 92.61% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (107814763)
• CantataDB: -
• Mirbase: lja-MIR7534 (MI0024418)
• Ncbi protein: Link to NCBI protein (XP_019416838.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;