Ll_transcript_473299

• Id Trinity: TRINITY_DN52003_c0_g2_i1
• Name Transcript: Ll_transcript_473299
• Sequence: CATTTATACGAGCAGATGATGCCACCCAATTCTTGGATGTTATCCGTGCTGCTGAAGATGCCGATGTTTACAATGACTTGGTGAGATACTTGCTGATGGT AAGGCTGAAGTCCAAAGAACCCAAGGTGGACAGTGAGCTTATTTATGCATATGCAAAGATTGACAGGCTTAGTGACATTGAGGAGTTCATTCTTATGCCG AATGTGGCCAATCTGCAAAATGTTGGTGACCGACTGTATGATGAAGAACTATATGAGGCTGCAAAAATTATATATGCTTTTATTTCTAACTGGGCCAAGT TAGCAGTCACGCTTGTGAAGTTGAAACAGTTCCAAGGTGCCGTTGATGCGGCAAGGAAAGCTAACAGCGCAAAAACATGGAAAGAAGTTTGCTTTGCATG TGTTGATGCAGAGGAGTTCCGTTTGGCCCAGATATGTGGACTCAACGTTATTGTTCAGGTGGACGACTTGGAAGAGGTCAGTGAATATTACCAAAATCGA GGTTACTTCAATGAGCTAATATCCCTCATGGAGAGTGGTTTAGGATTGGAACGAGCAC
• Tissue: pods
• Gene name: LI_gene_189259;
• Additional information: details;

Expression of Ll_transcript_473299

FPKM

• PAB: 9.8
• PNAB: 37.5
• PS1: 44.2
• PS2: 36.6
• PS3: 45.5
• PW1: 38.4
• PW2: 46
• PW3: 33.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473299

• Blastp: Clathrin heavy chain 1 from Oryza sativa with 93.51% of identity
• Blastx: Clathrin heavy chain 1 from Oryza sativa with 93.51% of identity
• Eggnog: clathrin heavy chain(ENOG410XPH1)
• Kegg: Link to kegg annotations (4349546)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416840.1)
• Pfam: Region in Clathrin and VPS (PF00637.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;