Ll_transcript_471935

• Id Trinity: TRINITY_DN52004_c3_g1_i14
• Name Transcript: Ll_transcript_471935
• Sequence: GAATTAGGAACCCGCACTAACCTTCTTCTACCTGTTCAGACCAGACACTCTTTTCAGTTCTTGTTCCACAACCCGACAAAACCCTTTTCCTCTGTTCCCA GTAAGAAAGAATAATATTACTCCAAAACCCTTTCCTTTTTGTTAAATCCCCTTCTCTCTCTTCAACCATTTCCACACTATATATTTTCCCACAAACAAAG TCTTGTGAGAAAGAAAGAAAGACAGAAAGCGCTGGAGTAGAGAAAATAAATTATATAGTACAGTCCATCTTCTCTCTATTACACTGTCTTTGTGTCTTTC ATTTTCACTTCAGTTACACTCAAAGGGTGAAGATGATAGCTCTTTACAAACTTGAATCTCGTGGGATAGTGTAGTTTTCTCTAAAGTTTTAATCTTCACT ATTCTCTTTCTCTCTCTGTAACTTTCACTTTCTTCTCTCATTCTCTCTCTACTTCTCTGTTACCGGAGAATGGACTGCTGGTGCCGGAAACTGACCGTAG TGAACTTAGATCCAGTCAGAAAACGCAGCGGCGGCTTGAGGACAAAACAAGCGGGAAGAGGATCGTGCCGTGGAAGTTAGTTTTACCGACACGAGCTCGC CGGGAAATGCTTCTTCTCCGGTTTTGGCGACTTTATTTTCTCTCTCTTAGTGAACGCTAGTGTTGCTTCTTCATTACTTTGGAAAAAGAAAACTTTTTTA CGGTTTTGAGACCCCTTTTGTTGAAGATAAAATGGGGTTTTTATTGAAGGAAGCTTTGAAGACTTTATGTACTCGGAATCAGTGGTCTTATGCCGTGTTC TGGAAGATCGGTTGCAACAATCCAAAGCTGTTAATCTGGGAAGATTGCTTTTATGAACTCTTGCCATCTCTTTTGCCTCCACGCATCGTTGGGACATCTA ATTTGCCATACCAAGATGGGGAAGGATGCTGGTTTTCTTCCGAGTCTCAGCTGGGGATTCAGGAGGACAAAGTTGGTTCTTTGATTAACAAAATGATGGT GAACAATTCAGTCAATATCATTGGTGAAGGGATAATTGGACGGGCAGCCTTTACTGGAAACCATCTGTGGATTCTCTTGAACAATTTCACCAGAGATGCA TGTCCACAAGAGGTATATACTGAGTTTCGCTACCAGTTTTCAGCTGGAATACAGACACTAGCTGTTATTCCAGTGCTTCCCCATGGTGTTGTTCAACTCG GTTCTTTCTTGCCAATAATGGAAAATATGGGATTCGTGAATGACATGAAGAGCTTGATCTTGCAATTGGCAAGTATTCCTGGTGCCCTTCTATCTGAAGA CTATTCAGCAAAACTTTCTTCTGAAAGACTTTCTGGGCCAATGACTGATGGTGTACCGGTGACTGTTGATCTACCTGTCAGTACCTCTAACTGCACTCTA TCACTACCTAATGATGATTTCCGTCAACCAAGTAATTCATCTCATGCTTCTTCGAGGCCTATTGCTCAACCCATTAATAATTACCAGGGTTCTGTATTGA TGCCTCAAATGCAGAACCTAAACCAGTTATCACGAAATTATGGTAACTTTTGCCACCCAACGATTCATTCAATGAATAGAGCATTTGTCAGTACCCATCA AGAGAATAGAGTTGTTGAGGCTAGAGCTGAAGTGATACCCTCAAACCTTGATTTGTATATGCAACAACAGCATTCTAATGCATATAATACAAGATATCCA TTCAACGAATTAGCTGCTTTTGGGCAATCGAACTTCAGTGATGGCACACTAAAAAATATGGAACAACAAATCTTATCGGGCATTGGGGGACAGGGTCATG TTAATCGTATCATGAATCCATCAAGTACCTCAAATATTTCCCAATTGAAAAGAGAGGGTGGCCATATTCTTCAACAGAGGCAGAGTTGTGTTAGTAATTC AGTGCTTGGAGGAATCCCAATACATAATAGAATGAGTAATCTTTTGAGGACAAATATGTTCAACAGCTCAGTTTCAAACTCACCAAAGGTATCTGACGCT AATTTTTCTGGAATACAAAAAGTTGCAGAAGGACTTCATAATGATAATTCAACTAAAGCTGGGACTTATTCTCTGCCTAATTTGGCAAATCAATCAGTTG CTAGTCACATGCATTTTGATGGTTCTCATCAGCAGACTCTCCCTATAGATTTAAAACACGATCGTGGTACTTTTGCTTCAACTGATCAAAGAATAGATGA TGATTTGCTTCAGGCCCTTAAGATTCCATCTCTTCACCTTGAGGAGCATGTGTCTATGAGTGATCACATCCCAGGTTTTGCTCTTGATCACCTCAATAAA GATGGTTCCAGCCAACATATGATGAAAGTGAATGCTAAGTGTGAAGAAGCTAGTGCTCAACTTCCATCAGGCGACGATCTCTTTGATGTTTTAGGTGTTG ATTTCAAAAGGAAACTGCTAAATGGAAATTGGGATGAATTGCTTGCTGATGAATCAGATGCCAATGCAGAAAATCAGGATAAAAATCCAACAGGCATGAG TGTGCAGTCTATAGGTCCCGATAATAGTTATTCAGTTAGTGAAGCGATATCAGATAGTGGAATTTTCTCTAGGATGGACACCGACCACCTCTTAGATGCT GTGGTATCAAGGGCTCAATCTGCTGCTATACAGAATTCTGATGATATGTCTTGTAGGACAACATTGACAAGAATTAGCACCACCTCTATTCCCTCTCCTA TCTCCAAGCAGGTCATGTCTGATAATGTTGTCAAGGGGAAATTGATCGATTTCCCTAAAATGGGTGATAAAATAGGAGCTGTGGAAACTAGTTCTTTCAA GTCTGGGTGTAGCAAGGATGATGCTGGAACTTGTTCTCAAACCACTTCCATATATGGGTCTGAACTTAGTTCATGGGTTGAGAAAGTTAGCAATGGGAAG CATGAAAATAGTGTTTCAACTGGATATTCTAGGCGGCCAGATGAAGGTTGCAAGTCGAACCGCAAAAGACTTAAACCTGGAGAGAACCCTAGGCCTCGAC CTAAAGACCGTCAAATGATTCAAGATCGTGTGAAAGAGTTGCGGGAAATTGTGCCAAATGGAGCAAAGTGTAGCATAGATGCACTTTTGGAAAGAACCAT CAAACATATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACATACTGGGGAGTCAAAGATTCTTAGTAAGGAAGGTGGGTTGCTTTTA AAAGATAACTTTGAGGGAGGGGCTACATGGCCATATGAGGTTGCTTCACAATCAATGGTTTGCCCTATCATAGTCGAGGATCTGAGTCCTCCTGGTCAGA TGCTAGTGGAGATGATTTGTGAGGAACATGGTTTCTTTCTTGAAATAGCCGACTTAATCAGAGGATTAGGTTTAACCATCTTGAAGGGAGTCATTGAAGC TCGAAATGGCAAGATCTGGGCACGCTTTGTTGTCGAGGCAAACAGGGATGTAACAAGGATGGAGATATTTATGTCACTGGTTCATCTTTTGGAGCAATCG GTGAAGGGTAGCTCATCTTCATCCAATGCAATTGATAACAACATGACAGTGTATCATTCTGTTCCACAAGCTTACCCAGATAGCAGCAACTGGTAGGCCT AATAGTTTGCAATCAGCTGTTCGAGTACTATATAGTTTCTTGATCTGGATTTGTTTATGAGAGCAAGTTTGATAAAATCTTGCGATGACCGACATCAAAT TCAGCCGAGATTTCCGGCTATCTTAACTTTGTCTAACCGATGTTTCATATCCGAGTTAATCTTAGAGGGGATGTGTTTAGTTAGTTAACGAGGATCTCAA GATTAATATGCCCCGGTTTCTCCCACCTGCAATATGACCTATTATGGGTTGCCAGTTTCTGCTGATCCGGTGGCTGCAAATTGCTACGCAGTTGGTGTTA TGATTCATATGTATAGATCTTGTAAGATGGGGTTTATGTGTTTTATCTTCAACCTGTATCATTTGTTCTTGTTTTTTTATACATTTTCTCCCTTGTTTTT ATTTATTTGTTGGAGTGGTGATCTTGGCTTTTTTGTCATAATACTAATGTTACAGATATTAGCTGTGTACTTTATATATATATAAACACTTATTTTGTTG GTTGGAAATCAAAA
• Tissue: pods
• Gene name: LI_gene_189266;
• Additional information: details;

Expression of Ll_transcript_471935

FPKM

• PAB: 0.2
• PNAB: 8.3
• PS1: 7.5
• PS2: 2.8
• PS3: 4
• PW1: 5.5
• PW2: 3.8
• PW3: 3.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_471935

• Blastp: Transcription factor LHW from Arabidopsis with 49.88% of identity
• Blastx: Transcription factor LHW from Arabidopsis with 48.47% of identity
• Eggnog: expressed protein(ENOG4111M9E)
• Kegg: Link to kegg annotations (AT2G27230)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453845.1)
• Pfam: bHLH-MYC and R2R3-MYB transcription factors N-terminal (PF14215.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;