Ll_transcript_471943

• Id Trinity: TRINITY_DN52004_c3_g1_i20
• Name Transcript: Ll_transcript_471943
• Sequence: GAATTAGGAACCCGCACTAACCTTCTTCTACCTGTTCAGACCAGACACTCTTTTCAGTTCTTGTTCCACAACCCGACAAAACCCTTTTCCTCTGTTCCCA GTAAGAAAGAATAATATTACTCCAAAACCCTTTCCTTTTTGTTAAATCCCCTTCTCTCTCTTCAACCATTTCCACACTATATATTTTCCCACAAACAAAG TCTTGTGAGAAAGAAAGAAAGACAGAAAGCGCTGGAGTAGAGAAAATAAATTATATAGTACAGTCCATCTTCTCTCTATTACACTGTCTTTGTGTCTTTC ATTTTCACTTCAGTTACACTCAAAGGGTGAAGATGATAGCTCTTTACAAACTTGAATCTCGTGGGATAGTGTAGTTTTCTCTAAAGTTTTAATCTTCACT ATTCTCTTTCTCTCTCTGTAACTTTCACTTTCTTCTCTCATTCTCTCTCTACTTCTCTGTTACCGGAGAATGGACTGCTGGTGCCGGAAACTGACCGTAG TGAACTTAGATCCAGTCAGAAAACGCAGCGGCGGCTTGAGGACAAAACAAGCGGGAAGAGGATCGTGCCGTGGAAGTTAGTTTTACCGACACGAGCTCGC CGGGAAATGCTTCTTCTCCGGTTTTGGCGACTTTATTTTCTCTCTCTTAGTGAACGCTAGTGTTGCTTCTTCATTACTTTGGAAAAAGAAAACTTTTTTA CGGTTTTGAGACCCCTTTTGTTGAAGATAAAATGGGGTTTTTATTGAAGGAAGCTTTGAAGACTTTATGTACTCGGAATCAGTGGTCTTATGCCGTGTTC TGGAAGATCGGTTGCAACAATCCAAAGCTGTTAATCTGGGAAGATTGCTTTTATGAACTCTTGCCATCTCTTTTGCCTCCACGCATCGTTGGGACATCTA ATTTGCCATACCAAGATGGGGAAGGATGCTGGTTTTCTTCCGAGTCTCAGCTGGGGATTCAGGAGGACAAAGTTGGTTCTTTGATTAACAAAATGATGGT GAACAATTCAGTCAATATCATTGGTGAAGGGATAATTGGACGGGCAGCCTTTACTGGAAACCATCTGTGGATTCTCTTGAACAATTTCACCAGAGATGCA TGTCCACAAGAGGTATATACTGAGTTTCGCTACCAGTTTTCAGCTGGAATACAGACACTAGCTGTTATTCCAGTGCTTCCCCATGGTGTTGTTCAACTCG GTTCTTTCTTGCCAATAATGGAAAATATGGGATTCGTGAATGACATGAAGAGCTTGATCTTGCAATTGGCAAGTATTCCTGGTGCCCTTCTATCTGAAGA CTATTCAGCAAAACTTTCTTCTGAAAGACTTTCTGGGCCAATGACTGATGGTGTACCGGTGACTGTTGATCTACCTGTCAGTACCTCTAACTGCACTCTA TCACTACCTAATGATGATTTCCGTCAACCAAGTAATTCATCTCATGCTTCTTCGAGGCCTATTGCTCAACCCATTAATAATTACCAGGGTTCTGTATTGA TGCCTCAAATGCAGAACCTAAACCAGTTATCACGAAATTATGGTAACTTTTGCCACCCAACGATTCATTCAATGAATAGAGCATTTGTCAGTACCCATCA AGAGAATAGAGTTGTTGAGGCTAGAGCTGAAGTGATACCCTCAAACCTTGATTTGTATATGCAACAACAGCATTCTAATGCATATAATACAAGATATCCA TTCAACGAATTAGCTGCTTTTGGGCAATCGAACTTCAGTGATGGCACACTAAAAAATATGGAACAACAAATCTTATCGGGCATTGGGGGACAGGGTCATG TTAATCGTATCATGAATCCATCAAGTACCTCAAATATTTCCCAATTGAAAAGAGAGGGTGGCCATATTCTTCAACAGAGGCAGAGTTGTGTTAGTAATTC AGTGCTTGGAGGAATCCCAATACATAATAGAATGAGTAATCTTTTGAGGACAAATATGTTCAACAGCTCAGTTTCAAACTCACCAAAGGTATCTGACGCT AATTTTTCTGGAATACAAAAAGTTGCAGAAGGACTTCATAATGATAATTCAACTAAAGCTGGGACTTATTCTCTGCCTAATTTGGCAAATCAATCAGTTG CTAGTCACATGCATTTTGATGGTTCTCATCAGCAGACTCTCCCTATAGATTTAAAACACGATCGTGGTACTTTTGCTTCAACTGATCAAAGAATAGATGA TGATTTGCTTCAGGCCCTTAAGATTCCATCTCTTCACCTTGAGGAGCATGTGTCTATGAGTGATCACATCCCAGGTTTTGCTCTTGATCACCTCAATAAA GATGGTTCCAGCCAACATATGATGAAAGTGAATGCTAAGTGTGAAGAAGCTAGTGCTCAACTTCCATCAGGCGACGATCTCTTTGATGTTTTAGGTGTTG ATTTCAAAAGGAAACTGCTAAATGGAAATTGGGATGAATTGCTTGCTGATGAATCAGATGCCAATGCAGAAAATCAGGATAAAAATCCAACAGGCATGAG TGTGCAGTCTATAGGTCCCGATAATAGTTATTCAGTTAGTGAAGCGATATCAGATAGTGGAATTTTCTCTAGGATGGACACCGACCACCTCTTAGATGCT GTGGTATCAAGGGCTCAATCTGCTGCTATACAGAATTCTGATGATATGTCTTGTAGGACAACATTGACAAGAATTAGCACCACCTCTATTCCCTCTCCTA TCTCCAAGCAGGTCATGTCTGATAATGTTGTCAAGGGGAAATTGATCGATTTCCCTAAAATGGGTGATAAAATAGGAGCTGTGGAAACTAGTTCTTTCAA GTCTGGGTGTAGCAAGGATGATGCTGGAACTTGTTCTCAAACCACTTCCATATATGGGTCTGAACTTAGTTCATGGGTTGAGAAAGTTAGCAATGGGAAG CATGAAAATAGTGTTTCAACTGGATATTCTAGGCGGCCAGATGAAGGTTGCAAGTCGAACCGCAAAAGACTTAAACCTGGAGAGAACCCTAGGCCTCGAC CTAAAGACCGTCAAATGATTCAAGATCGTGTGAAAGAGTTGCGGGAAATTGTGCCAAATGGAGCAAAGTGTAGCATAGATGCACTTTTGGAAAGAACCAT CAAACATATGCTTTTCTTGCAAAGTGTAACAAAGCATGCTGACAAGCTGAAACATACTGGGGAGTCAAAGATTCTTAGTAAGGAAGGTGGGTTGCTTTTA AAAGATAACTTTGAGGGAGGGGCTACGTGGGCATATGAGGTAGGTTCACAATCAATGGTTTGCCCTATCATAGTTGAGGATCTGAATCCACCTGGTCAGA TGCTAGTGGAGATGCTTTGTGAGGAACGCGGTTTCTTTCTTGAAATAGCTGACTTAATCAGAGGATTGGGTTTAACCATCTTGAAGGGAGTCATGGAAGC TCGAAATGACAAGATCTGGGCACGCTTCGTGGTTGAGGCAAACAGGGATGTAACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTCTGGAGCAAACA GCGATGGGCATTGCATCTTCTTCAAATGCGATTGATAACATGACGATGTATCATTCTTTCCCGCAAGCTACCCAGATATAGCAGCAACTGGTAGGCCTAG CTTGTAGCTTGCAATGAGCCACCTGGTCTGGATTTGTTGATGGGAGCAAGTTTTTGGTAAAATGCTCGCAATGACCGACTTCAAATCCAGTCCAAAACTT CAGGCTATCTTAACTTTATCTAACCGCCGTATTCACCTTATATATTACCTCATCATGGAGAGGGTAGATGTGTGCTTAGTTTGTGAAGGAATATGCACCG GTTTCTCCTGTGCCCGAAAATATATACCTACCCTGTGTTGCAGTTTCTAATGATGCTTGTAGACATATCTTACATTTTTCCTGTGAGTAATTCTACCTGT GATGGTTCCTTATTGCTCTGCAGATGTATAGATCTATTAGGATGGTGGTTTGTGTTTATTTTCACCTATGTTCTTTTCTTTTTAATATTTTTCTCCTTGT TTTTTTATTGGAGTGGTGATCTTGGCTTTGTCATAAGACTAATGTTAATTACAAATATCAGATCTGTGGCTTGTAAATGTGGAGTGTATCATTCTATGTA CTGTTGTATTCGGTAAATAGTTTTGGGAAGTTTAGCCGAGCATAGTTTGACATAATTGTTGCACCTAGTAAAATCAATTATTTAATATACCATAAAAAAT CTCGCAGTTCAACTTTGTTGTAGCTGCAAAACATGAATCTTTATCCTTTATTCAAGGACGTTATAATTAACTGTAAAGTTTAATCTACATAATTGCTTTA AAATTAGTCTTATT
• Tissue: pods
• Gene name: LI_gene_189266;
• Additional information: details;

Expression of Ll_transcript_471943

FPKM

• PAB: 17.5
• PNAB: 13.2
• PS1: 15
• PS2: 4.4
• PS3: 8.3
• PW1: 19.1
• PW2: 14.2
• PW3: 10.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_471943

• Blastp: Transcription factor LHW from Arabidopsis with 50.23% of identity
• Blastx: Transcription factor LHW from Arabidopsis with 48.85% of identity
• Eggnog: expressed protein(ENOG4111M9E)
• Kegg: Link to kegg annotations (AT2G27230)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453845.1)
• Pfam: bHLH-MYC and R2R3-MYB transcription factors N-terminal (PF14215.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;