| Id Trinity | TRINITY_DN52006_c1_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_473643 |
| Sequence | GTTCTTCTCACGTTCTACAAGTTTCTGAAAGGATGGCTCGCCTTGTTGCCTCCGATCCGGTTCGCTCAATTCCTCTTTCGCTTTTTGATTCCTTCGACAT TATTGTTTGTTTCGCAGTTCTTAATTGTTGTGATTTTTTTAATTGACTTTGGTGCGTGCATTAATTATGTGTTGGATTAGTTAAGAAATATGTTATATTA TTACAATAATTGATTAATTTGTATAATTGGTTTATTGCTATAATTGGATGTGTTTGATTAAGAGGTTAGATTTAGTCTAATAAAGTTTGTTTTATAATTG ATACTTAGTTTTGTAGGGGTGAAATGAGAAAATATGGTTGATTTCAAAATAATCAAATGTAATTTGAATAAAAAAATAAAAAATATATGCACTGATAATG AAGATATTTATACACTCATATAATAAACTTTTAGCTTCTCTAAAGTATGTGCCTATAAAAACAGTTTATCATATTGTAATGGAGATTTTTAAACATGTCA GATTAAATTCTAAATAACCTCTTTGAAAGCTGTTTCCTAGGGAAACGATCTTTCCCAAAAACCGTGTAGATGATTCTTTTGTATCCAATAAAATCAGCTT GTCAGCATCCAATACATGGTCTAGATGGTCTTAACTTTTAAACTATGGTTGGGTTGCAATCATCAAAATTGTGGACAATTGCATACAAATGTGACTTATG TAGCCAGGGTGGCTGCAATTGCAGTTGCAAGAGACTACCAAAGCTGTAGCTGTGGATTACAGTAAAGAACCATGGACTTCGGTTTTGGTGCTTATGTTGT GCCAGTCCATAAGTTTCATGTGGAGTTCATAATGAGATTTTTTAACTATAAAATGAAATTTGCTTGGGATTTGTTTGCAGGTGGGAACTAGATTATCATA GATAAGCATTATGAGAATTCAGTGGTTAGTTACTGTTTACATGTCAATGTACAGCTTATAAAGCTGCTCGGTATTGGTTCCGGTTTTTTTCATTTTGTAG GAGTTTGGTGATAAATATGATTTCGGCTTTTTTTAAGCTCCTGAAACTTTGATTTGTTGTCTGACACTTTTAGGTATTTAGAAAGGATAATCGACCCATG CTTGGTAGGAAGGAGTTATTTAAGAACACTTTGAGGAAAGCAACTTATGCATGGAAAAGGATTATTGAGCTCCGTCTTAATGAAGAGGAAGCTTCCATGC TTAGATCCTTTGTGGACGAACCTGCTTTTACAGATCTTCATTGGGGAATGTTTGTACCTGCTATCAAAGGACAAGGCACTGACGAACAGCAGAAAAAGTG GTTGCCTTTGGCTCAAAAGATGCAAATAATTGGTTGCTATGCCCAAACAGAACTTGGCCATGGATCTAATGTTCAAGGGCTAGAAACAACTGCAACATTT GATCACAAAACAGACGAGTTTGTTCTTAACAGCCCAACATTGACTTCCAGCAAATGGTGGCCTGGTGGCTTGGGTAAAATATCTACACATGCAGTTGTTT ATGCCCGTCTAATTATTGATGATAAAGACTATGGAGTGCATGGTTTCATTGCCCAGCTGAGGAGCCTGAATGATCATCTACCACTTCCTGGCATAACTAT TGGTGATATTGGGATGAAATTTGGAAGTGCAGCATATAACTCCATGGATAATGGGGTTCTAAGATTTGATCATGTCCGAATTCCAAGGAATCAAATGTTA ATGAGGGTATCACAGGTTACAAGAGAAGGAAAGTATGTGCACTCCAGTGTTCCAAGGCAGCTCGTTTATGGTACTATGGTATATGTGAGACAAATAATTG TTTTCGATGCATCAGTTGCTTTGTCACGAGCAGTTTGCATTGCTACAAGATATAGTGCTGTTCGAAGACAGTTTGGGTCGCATAATGGAGGTCCTGAAAC ACAGGTAAGCTTTAGAACCCTCATTGATGCATAGCTGCTACTGCAATATTTTTCAACAAATAAATTTGTAGGAAGCAATTGGGGGTGGGGGCTGGGTTAA TGTGAAGTTGCTGTTGATTTAGTATGTAATTTTGATCTTGACTCTCTAGATTCAAAGCAGTCATGGTTTCTACTTCTCTTTATCAGTACAAGAAACTTTA TTAGTACAATATAGTACCAGAGGTACACTTAAAGCGAAGTGCAACGGGACAACATTCTCCTCCTAAAACAGAAACACGATACAAGACCACAGCACACTTG TACATGAATTGGATGATAGGGAAATGTCTATTAGATCTATTGATCAGTCAAAACTGCAACTGGGTAGTTGGGTTTGCATCATTGTCCTTATAGAAGTTTC AGATAACTGTATTCATTTTTATTGTCAATGATTATGCCAACCTATATCTCTTTTATGGCTTTTATCTATTCTGTTCTGTAGCATGTCTCACTTTCTGCTG TCTATTTCTTTATAGGTGATTGATTACAAAACACAGCAAGCTAGACTCTTCCCTTTGATAGCCTCTGCATATGCTTTTAGATTTGTTGGTGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_189281; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_473643
| Blastp | Peroxisomal acyl-coenzyme A oxidase 1 from Arabidopsis with 81.41% of identity |
|---|---|
| Blastx | Peroxisomal acyl-coenzyme A oxidase 1 from Arabidopsis with 80.58% of identity |
| Eggnog | acyl-CoA dehydrogenase(COG1960) |
| Kegg | Link to kegg annotations (AT4G16760) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423731.1) |
| Pfam | Acyl-coenzyme A oxidase N-terminal (PF14749.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |