Id Trinity | TRINITY_DN52007_c2_g3_i12 |
---|---|
Name Transcript | Ll_transcript_471834 |
Sequence | GATCCTTAGCGCACTAAACTACGCGGCCTATGCGCATTGCGCACCCTGTTGAATCACTATTAATTAGAATCATTACACTCACCGTATCTATCTATTTCAT CGTCACTTTCATTCATTCAACTAATTGATTTCTCTGTAAACAAACAGTGATGATCACCATGCAAATCGTTTCACTCTAATTTGATGATATTCTTTCCTTT CTCAATTCATCAATGGACCGATGCTTCCGGTTTTTTCCCTGCCTCGTTGATCCTGGTCGAAGGTCTTCGTTGTGGTTGAAGTTAGCTTTCGTGACAATTC ATGTTGTTTATATAGCTATTCTCTTTTTATTTGATGGAGATTTGGTTGAAAAGACTAGGAAGGAACCGTGGTATGTTTTATTGCGTGATTTTTTTCGTTA TTGATGAAATTCAGTTCACGTTGCTGATTTTGCTGGCTGTGTCGTTGATTTAGTTTAAATTTACGTGTACTTGTGGAATAGTTTAAACTTAATGTTATTG ATATGCAATGAATTCTGAGATATCATTAGATTTTTATCTTAGGGATTTTTTAAGGCAGGTCGGTTTTGAGTGATTTGGATTGCGGCTCCGGTGATTGAAA AAATAAATCAATTGACAAATGTTTCTTTCAGTTGCTTAATTGAATGGAATGTCGCGGTGCTATTTAAGTATTAAAAACATTAGATGCAATGTCACTATTC ACAATTGGTATATCTAAGAGTTTTTTTGAAATTAAACACATGTTGTGTAGAAATGTTAAGATCGATAACTGTCCTGTTAATTGTTGATCAATCAAGCTTG GTGATCATGTGATAAATTCAGGCAGGCCAATGCTTGGTCATCATTGTCCTATTATTATTACTATTATTACCACTACTATTTTAACTGGACTTTTGACGTG AATCGAGATATTTTTTGAAGACTGCGTAAACGCTAGGTATACAAGTGAAGATGCTTTGTATAGTTGCCTCTATCAATTGCAAGGAAGCACAAGCACTTCA TATGTCGGTTATGTATTTGCATTAGACAGTTTTGAACACTTTTAACTATATTCTTTAACGTTTTATATTTTTTGCCATATTCCTGTGTCATGTCCGTGCT TCCCTGATCAATTGTTTGTCGTGACTCGTGTGCATGGAGAAAATTGGTGGCACTGTTCCTTTTGAGCAGGATAGCTAAGCCTCATTCTTAGTTCAGAGAC AGTTTTTGACCAGATGAATGGCACACTATAATATATTAGGGATGGTCATGAATATCTTCAATGATGGGGTTTGCCCGTTTTCATTTCTTTTAAAAAGTCA TTAAGGTGTGGATTAGTCCCTTGTTTCAAAAGTCAACCTTACTGATATATACCAACACATTCCTTCTGCACTTCCAGGAGATAATATGAGAAGTTTGATG ACGCCTGAATAAAATCTATCACTTTTTGATGAATTTATAGAAATTAAGGAAATCTCTGGTTTAACGTGGCCTTGTACACGAGTGTATGATTTAGTGTTTC CAAATAGTTTTATTTGGTTGCTATTATTTTTCCGACTTTCTATTCATTGCTTGCTTTTCTGACAGGTACACTGCTTTATACCTGCTTCTGTGTGCTGTTA CTTTAATACAATACTTCGCAACCTCTATTGCCTCTCCAGGCTATGCCCTTAATGCCATGAGGGCTGTTAATGAGAGAAATGCAGTATACAGACAGACATC AGAAACCTCAAATCAATCAGCTTCAAGCAGAAATGGGAGCTTCATTGTTACAGTGGAAGGAAATCTGATCGGAAGAAATGTTTCAGGAAGTAATGCATCA GATTGGTCAAAGTTGGTGGCAGACTTGTATTCGGCATCACCAATCAGAACATGGACATGCACCTACTGCAATGTGGAGCAGCCTCCGCGAACAAAGCATT GCCATGATTGTGACAAGTGTGTTCTTCAGTTTGATCATCACTGTGTTTGGCTTGGCAACTGCATTGGCCAGGGCAATCATTGTCGATTTTGGTGGTATCT CTGTGAAGAGACAGCACTGTGCCTCTGGACTGGTTTCTTGTATGTTTCATACCTGAAGGCGCACATCACATGGGTTTGGTGGCAGGATGTGATTGTGATA CTACTCTTGATCTTTCTGGCAATTTCTCTTATCTTTCTACTTCTCCTAATGCTATTTCATAGCTATCTTATTCTGACAAATCAGACTACATATGAACTTG TAAGGAGAAGACGAATTAATTATCTAAGGGGGATTCCAGAAAGAGTGCATCCATTCAGTAAAGGAGTTTGTAGAAATGTATATAACTTCTGCTGTTTAAG GAGCAGCTTATACAACAGTTTGGATCCCCTACCTTTACCTGAAGAGATAGCCGAGAAGTCAATACCGTACACATGCCTGGATGTTGTAACATGTCGATGT TGCTGATGGATTTAGGTAGAAGTCTTTTCCTCAATTGCTGATGGTTTGTGGTAGAAGTCTTTTCCTCAATTGCTGATGGTTTGAGGTAAAAGTCTTTTCC TCAACAGTTATATTTTGAGAACAAGGAAGTTTGCCAGCGCGCTCTTTGCTTAGACGGGTAGATGTCGACATAAGGATATTTGTTTTATGATCTTTCTTCT GCTATCCGTACTTTGCCCCATTTTTTGGAAGGTGGTGTTTCAAGTTTAGTGTATGGTTTCAGTACTAGTGTTTTCTTTTGCTGATGATGGATTTATACTT GATACTTCATAGATCTGTATAGATGGGTATTATCGAACTGACTCACTACATGGAATTCAAGGGGGCATTAACAGTATTCAGTTGCATGCAGTTGAAGTGC AGTCTCTTGCTTAAATTCATGAAGTATTGAAGTAGTTGAGAAGTTATTTTTCTGAGTAGCAAAAGAAAGAGTTGACGCTCATGAAATGCATCTATTGAAA TATCTGGAATTGCTTTTTCTGTTTCTGTACCTTGAGTGATTACCAACTAATAGAACATGGAAATATTTTATTGTAAAAATTTGGTTTTGTGATTGGTCTT TCCAAGCCCATCATACTGCTAAATTTAAAAAAAGGTGGAAATAGAGAAAAATAGTTTACTGATCTTGCAGCGTTAAATGTATTTGCTAAAAGTTAAAACT GTTACATACCAGTTTTATTTTACATTCTTTCTAAG BLAST |
Tissue | pods |
Gene name | LI_gene_189294; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_471834
Blastp | Protein S-acyltransferase 10 from Arabidopsis with 60.4% of identity |
---|---|
Blastx | Protein S-acyltransferase 10 from Arabidopsis with 58.11% of identity |
Eggnog | Zinc finger, DHHC-type containing(COG5273) |
Kegg | Link to kegg annotations (AT3G51390) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421300.1) |
Pfam | DHHC palmitoyltransferase (PF01529.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |