| Id Trinity | TRINITY_DN52007_c2_g4_i1 |
|---|---|
| Name Transcript | Ll_transcript_471805 |
| Sequence | TTGAACTCTTTTCACCAATTTTCTAAGAACTAGTTTTCACAATAATCATCACACACAATCTCCCAACATCAACGAACCAAATACCAGAATCGCCGGTTGC AAGTTCGTCTCCCCCACCCCCACACTGATAGTCCCCCCTTCTTATTGAGGTTAAGACCACAATATTTATTTTCCCACTTGCTCCGTTGGGAAAAATTCTC TTTCACTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTTTCTGCTTCTTTTCTCTTCTCCGTGTTCCTTACTCTGCTGAATCAGTTTCC ACAGCAAAAAAAAAGAAAGAAAAAAGACGAAGAGGAAAAACGAACCGTCGTTGTCATCGCCGTCACTGTTACCGTCACCGTCTTCATCATGGAGTTCGCA GGCGCCACGGCGACTCTCTCTAAGAAGCTCTCCAACGGTTACGGTGTCTCAGGAAGATCGGCGTACGACGGCGTTTTCGCTGCTCCGGTCAAGCTCAGAG CTTCGAGCTTCTCTTCTCGACTAGAAGATTACCGTGAGGTCTTCGGAAGCTTCGGAGCTTCATCGATTCCGGTTCTCGAAGTTCCTGAGCTCAAAGAGAG GAAGAAAAACGATGATATTCGTCACTCGAAGCTCGATTACTCCAAAGTCTTCGGTGGGATCGGGAATCTAGAAGCTGCTGTGCCATTCGAGGAGCTGATT CGCGAACCGAAACACAAAAAGAGAAATAGTTTCAGTATGGGAGAATCACCGGAACGGAGCAAAGCCAAGGGAGGAAACCAATCTTGCAGGGAAGATCCCA CTAAATATTCAAAGGAAAATCCGACACTATTGCGGTCTTCCAATGATACCAGCAGGATCAATATGTCATATCTTATGGTTAACCAGGGAAGTGATGTAGC TCAAATCCATGCTGTCCCTGCTTATACGTGTTTAATTGAAGAAGTCAATCCTGTGAAGGTGAACAGAGACAATCCTGTGAAGGTGAAAAGAGACAATCCT GTGAATGTGAACAGAGACAATCCTGTGAAGTTGAACAGAGACAATAAGTCTGTACCAGGAACACATGATGATTGTTCCGGTATTCATTGCAATGAGGGGA TAAAGGAAAGTGGATGTTGTAGTAAATCATTATCTGATCCTTCACCTGATAATACTAAGAAACAGTCATCAAACAATGAAGTGAACGTTAAAAATAGATC TGAAACTATTGACATGTTTTTTGATGCATCTAAGATTAGCAATGGAAGTAAAGGAGCACATCACATCAAAATTCCTCCATTTGAGACTGTGGCGGGTAAC ATGGATTATCACAACGATGAAGCTGCGAGATCCACGGCAACCCAAGGCCATGCATCCAAAAGAGACAGATCTGAAGGTGCTGATTCACCGTCATACTTAG ATGACATTGTAGACTCAAATTCAGAGGCAGCTACTTCTGTAGCTGCTTTAAGAAAGGCAATAGAAGAGGCTCAAGTAAGAATGAAGGTTGCAAAAGAATT AATGAGAAAAAAAAAAGAAGGTTTTCCTAATTTTGTGAAACGGAAGTCTAATATTGACTCTAAAGCTGAGAAAAAAGAGGATAAAATCTCATGTAAAACA TTGAGCCTTGAAGAGATTAATACGAGGCAAACATTTGGAGAAATGGATGCTTTGACAAAGTTTTCTTATGAGGTAGGAAAGCCAACAATGAGAATGGAGA AAGTAAGATCAGATCTTGGGGCGAAAGAAATGTTAGTTGCTGAAGAAGCCATTCAAGCAACACTGAAGACATTGATATCAACTCAGGAAAAACATAAGGA AGAGTTTGAACAAAAAGAAGCAGATGATAATGCAAAAGTTATCGAGCTTAAAGAGTTAGAAAATAATAGGAAAGAGCCATGTATTGAAAACACAGGTAGG AATGCCTTTGACAAACCAGAAGAATGTGATCATACAATAGAAGTGATGAAGGAGTACCGGAAAGATGAAAACAATATAGAGAAGGTTCATGCAGCTAATG AAGCAAGTGCATGTGAAGAACTTGTTGTTGAAGCGAGACATACATATCAAGAAGTTGTAGATGAAACAAAACTGGTTCAGAAGACGTTTGATAGTGGAGC AACTGACAAGAGATTGAGGGTAAATGAAGAAGAGGAAGTTGAGAACAAGGTGACACCTTTCCATGAACCAGCAAACTGTGAAAGCAACCTGGGTGAGCAG GAGTTAGTACGAAGAGATGAAAACAAAGTTGCCTGTAAGCCAGAAGATGGGAAAAAGATTGAGGGGCGGAAAGAATGTCAAAGAAATTTGAGAGCTATTC ATGAACTCAAAGAGGTTGAGAGGAACATTGATCAAGAGCAAAAAGGAAATGAAGAGAAAGTTGAGGTGTCCAGTGATCCGGAAGAATGTGAGTTGCCAGA GTTTGTCGAGCCAATGGACAAGAGAGCATGCAGTCCACATCACCCAGACTTCAATAGTTTGGAGAGAGAAATAGAGAACTTGGGGTCTTTAGATGATATA AAGAGAAGTGACGAAACTGGTTTTCTAGATGTAAATCGAGAGGCAGAACATTCCTGTCAAAGGGAAGGCACCAAGAGTACAGTTAGCAATATCTATGTGC ATGAAATGCTAGAGCAGACTGTGGACCATATTCATGATGAGGAAGACATTTATTTAAGAATTACTCAGGATACTGAATTAGATGCAAATGAGAGCGTTCA ATATTCCAAAGCAAGTAAGAAGGAAATTGAAGGAGCCACTTCTCTGATGGAAGAAAATGAGGGGGGACGGGAAGATAACAAGGAGCCTGTAGAAGTAATT AGAGTGAGTCAAACTGATTCCAACTATGAGGATATAAAAGCAGAGGAAATTGGCATGACTATAGGAACCAGTTCTAGTTATGAGCCAGGTGAAATTGAAA AGTGGAGCAAAACTCAGGTTTGTGACACTACTGTTGAAAATGACGAAACTGTTGAAGTAACTCCAGCAGTTTATTCATATGATGTGCAAGATGATATAAT GGAAGCTAGTGATGCTTCATTCGGACTTCAAGAGAAGTATGACGAACCAGAATCTGTTCAAGAGACAAATGATTTCTATGAGAAAATTGCAGTTGAGACC TCTGCCTTTGTTCGATGTGCCCCTGAAATCAATGAAACAGTTAATCCAATGCAAAGTAGAAGTGAAACTGTTACCTTTGAAAGTGATGCTACATATTTTG CTGAAACTGACATGAAGGCTAGGAAAAATCAAGATCAGTGCATGGAAGAAGCAGAAAATCACTGCAACCCGCTAATGCTTAGTGAAGAGACAACTACCGA GTGTATAAAAATCCGTGAGGATGCAAAGGAGGCTAGTGTTTCTTTAGACGAAGAGATAGATGAAAATCGATCTAACTCCTCTAACGAGGAAATTTTGTTT GACAATGAACACAATATAGAAGAGTCTCAGGTAGTTACTATGTCTGGAAGGATATCAACCCCCTTTAAAGAAGAGGGTATTGAAACAATTCACAGCAATC TAGAGGAGAACCATCAAGCAGGCACGGCAATGGAAGAGAAGGAATCCAATGGCAACCTACAGACAGTAGATCTGGAAAAGGAACGCCTCAAGAAAATTGA TGAAGCAAAAGAGAGGGAAAGAGAAAAGGAAAAATTAGCTGTGGATAGAGCAATTCGTGAAGCTCGCCATCGGGCATTTGCTGAAACCAGAGAGAGGGTG GTTCAAGAGAGAGCTGCAGCTGAAGCTCGTCAGAAAAAAAAATCTGATGGACGAGAAGGGCTTGGAAAAACCATTGGCCATGCAAATGAGAAAAAACCGG CTGAGAAGGCTGCTATGGAAGCAAAACTTAAAGCTGAACGTGCTGCTGTTGAGAGAGCAACTGCAGAGGCACGAGCACGTGCGCTAGAAAGGGCACTGTC TGAGAAGTTTGCTTCCGAATCAAGAAATAAATCTGATAAGTCTGTTGCAGAGAAGTTGTTTGGTGCTTCTAGAGATAATGGAATGAAGCAAAATTTCCAT TCAAAATCTTTCAGCTATGGAGTCCGTGATTCTACTGATGTATTTGACGGAGCTAATGGCGATTCTGCTCAGAGATGTAAAGCTAGGTCTGAGAGACATC AAAGAATAGGAGAACGTGTGGCAAAGGCTCTTTCAGAAAAGAATATGCGTGATCGACTAGTGCAGATGGAGCAAGAGGAGAGAAATAGGATAGCAGAAGC TCTTGATGCTGATGTCAAAAGGTGGTCAAGTGGGAAGACTGGAAATTTGAGGGCATTGCTTTCAACATTACAATATATCCTTGGTCCCGATAGCGGATGG CAGCCGATTCCTTTAACAGATATAGTAATGACCTCTGCTGTAAAGAAAGCTTATCGTAAAGCTACTCTTTCCGTGCATCCTGACAAGCTACAGCAGCGGG GAGCAAGCATTCAACAAAAGTACATTTGTGAGAAGGTTTTTGATCTCCTAAAGGAAGCTTGGAACAGATTCAACATGGAGGAACGATAAACAATTCCCAG TGTTGCCTAATAACAATGTGTATGCTGGGTACAATTCTCTCAAGTGTATTTGTTAAATGATAAGTGTAATTTAATATATGAAAGAATTCATTAAATTAGG ATATTAGGATATCAGCAAAGTAGGATGGCATGCAAATGGACCCTTTAATATATAGCTCATTTTCTACCGTTTTCTTCATTTACTCTCATCATAATTCATA AGTATGTTATTGAAATTATAAGTAGACAATTATTTCAAAATGGAGTTACAAGATACTAAGATAGTGTTTGGGATGTTCCCTTGGTAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_189295; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_471805
| Blastp | Auxilin-like protein 1 from Arabidopsis with 54.94% of identity |
|---|---|
| Blastx | Auxilin-like protein 1 from Arabidopsis with 75.17% of identity |
| Eggnog | UBA TS-N domain protein(ENOG410YGT5) |
| Kegg | Link to kegg annotations (AT1G75310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458164.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |