Ll_transcript_471813

• Id Trinity: TRINITY_DN52007_c2_g4_i3
• Name Transcript: Ll_transcript_471813
• Sequence: TTGAACTCTTTTCACCAATTTTCTAAGAACTAGTTTTCACAATAATCATCACACACAATCTCCCAACATCAACGAACCAAATACCAGAATCGCCGGTTGC AAGTTCGTCTCCCCCACCCCCACACTGATAGTCCCCCCTTCTTATTGAGGTTAAGACCACAATATTTATTTTCCCACTTGCTCCGTTGGGAAAAATTCTC TTTCACTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTTTCTGCTTCTTTTCTCTTCTCCGTGTTCCTTACTCTGCTGAATCAGTTTCCAC AGCAAAAAAAAAGAAAGAAAAAAGACGAAGAGGAAAAACGAACCGTCGTTGTCATCGCCGTCACTGTTACCGTCACCGTCTTCATCATGGAGTTCGCAGG CGCCACGGCGACTCTCTCTAAGAAGCTCTCCAACGGTTACGGTGTCTCAGGAAGATCGGCGTACGACGGCGTTTTCGCTGCTCCGGTCAAGCTCAGAGCT TCGAGCTTCTCTTCTCGACTAGAAGATTACCGTGAGGTCTTCGGAAGCTTCGGAGCTTCATCGATTCCGGTTCTCGAAGTTCCTGAGCTCAAAGAGAGGA AGAAAAACGATGATATTCGTCACTCGAAGCTCGATTACTCCAAAGTCTTCGGTGGGATCGGGAATCTAGAAGCTGCTGTGCCATTCGAGGAGCTGATTCG CGAACCGAAACACAAAAAGAGAAATAGTTTCAGTATGGGAGAATCACCGGAACGGAGCAAAGCCAAGGGAGGAAACCAATCTTGCAGGGAAGATCCCACT AAATATTCAAAGGAAAATCCGACACTATTGCGGTCTTCCAATGATACCAGCAGGATCAATATGTCATATCTTATGGTTAACCAGGGAAGTGATGTAGCTC AAATCCATGCTGTCCCTGCTTATACGTGTTTAATTGAAGAAGTCAATCCTGTGAAGGTGAACAGAGACAATCCTGTGAAGGTGAAAAGAGACAATCCTGT GAATGTGAACAGAGACAATCCTGTGAAGTTGAACAGAGACAATAAGTCTGTACCAGGAACACATGATGATTGTTCCGGTATTCATTGCAATGAGGGGATA AAGGAAAGTGGATGTTGTAGTAAATCATTATCTGATCCTTCACCTGATAATACTAAGAAACAGTCATCAAACAATGAAGTGAACGTTAAAAATAGATCTG AAACTATTGACATGTTTTTTGATGCATCTAAGATTAGCAATGGAAGTAAAGGAGCACATCACATCAAAATTCCTCCATTTGAGACTGTGGCGGGTAACAT GGATTATCACAACGATGAAGCTGCGAGATCCACGGCAACCCAAGGCCATGCATCCAAAAGAGACAGATCTGAAGGTGCTGATTCACCGTCATACTTAGAT GACATTGTAGACTCAAATTCAGAGGCAGCTACTTCTGTAGCTGCTTTAAGAAAGGCAATAGAAGAGGCTCAAGTAAGAATGAAGGTTGCAAAAGAATTAA TGAGAAAAAAAAAAGAAGGTTTTCCTAATTTTGTGAAACGGAAGTCTAATATTGACTCTAAAGCTGAGAAAAAAGAGGATAAAATCTCATGTAAAACATT GAGCCTTGAAGAGATTAATACGAGGCAAACATTTGGAGAAATGGATGCTTTGACAAAGTTTTCTTATGAGGTAGGAAAGCCAACAATGAGAATGGAGAAA GTAAGATCAGATCTTGGGGCGAAAGAAATGTTAGTTGCTGAAGAAGCCATTCAAGCAACACTGAAGACATTGATATCAACTCAGGAAAAACATAAGGAAG AGTTTGAACAAAAAGAAGCAGATGATAATGCAAAAGTTATCGAGCTTAAAGAGTTAGAAAATAATAGGAAAGAGCCATGTATTGAAAACACAGGTAGGAA TGCCTTTGACAAACCAGAAGAATGTGATCATACAATAGAAGTGATGAAGGAGTACCGGAAAGATGAAAACAATATAGAGAAGGTTCATGCAGCTAATGAA GCAAGTGCATGTGAAGAACTTGTTGTTGAAGCGAGACATACATATCAAGAAGTTGTAGATGAAACAAAACTGGTTCAGAAGACGTTTGATAGTGGAGCAA CTGACAAGAGATTGAGGGTAAATGAAGAAGAGGAAGTTGAGAACAAGGTGACACCTTTCCATGAACCAGCAAACTGTGAAAGCAACCTGGGTGAGCAGGA GTTAGTACGAAGAGATGAAAACAAAGTTGCCTGTAAGCCAGAAGATGGGAAAAAGATTGAGGGGCGGAAAGAATGTCAAAGAAATTTGAGAGCTATTCAT GAACTCAAAGAGGTTGAGAGGAACATTGATCAAGAGCAAAAAGGAAATGAAGAGAAAGTTGAGGTGTCCAGTGATCCGGAAGAATGTGAGTTGCCAGAGT TTGTCGAGCCAATGGACAAGAGAGCATGCAGTCCACATCACCCAGACTTCAATAGTTTGGAGAGAGAAATAGAGAACTTGGGGTCTTTAGATGATATAAA GAGAAGTGACGAAACTGGTTTTCTAGATGTAAATCGAGAGGCAGAACATTCCTGTCAAAGGGAAGGCACCAAGAGTACAGTTAGCAATATCTATGTGCAT GAAATGCTAGAGCAGACTGTGGACCATATTCATGATGAGGAAGACATTTATTTAAGAATTACTCAGGATACTGAATTAGATGCAAATGAGAGCGTTCAAT ATTCCAAAGCAAGTAAGAAGGAAATTGAAGGAGCCACTTCTCTGATGGAAGAAAATGAGGGGGGACGGGAAGATAACAAGGAGCCTGTAGAAGTAATTAG AGTGAGTCAAACTGATTCCAACTATGAGGATATAAAAGCAGAGGAAATTGGCATGACTATAGGAACCAGTTCTAGTTATGAGCCAGGTGAAATTGAAAAG TGGAGCAAAACTCAGGTTTGTGACACTACTGTTGAAAATGACGAAACTGTTGAAGTAACTCCAGCAGTTTATTCATATGATGTGCAAGATGATATAATGG AAGCTAGTGATGCTTCATTCGGACTTCAAGAGAAGTATGACGAACCAGAATCTGTTCAAGAGACAAATGATTTCTATGAGAAAATTGCAGTTGAGACCTC TGCCTTTGTTCGATGTGCCCCTGAAATCAATGAAACAGTTAATCCAATGCAAAGTAGAAGTGAAACTGTTACCTTTGAAAGTGATGCTACATATTTTGCT GAAACTGACATGAAGGCTAGGAAAAATCAAGATCAGTGCATGGAAGAAGCAGAAAATCACTGCAACCCGCTAATGCTTAGTGAAGAGACAACTACCGAGT GTATAAAAATCCGTGAGGATGCAAAGGAGGCTAGTGTTTCTTTAGACGAAGAGATAGATGAAAATCGATCTAACTCCTCTAACGAGGAAATTTTGTTTGA CAATGAACACAATATAGAAGAGTCTCAGGTAGTTACTATGTCTGGAAGGATATCAACCCCCTTTAAAGAAGAGGGTATTGAAACAATTCACAGCAATCTA GAGGAGAACCATCAAGCAGGCACGGCAATGGAAGAGAAGGAATCCAATGGCAACCTACAGACAGTAGATCTGGAAAAGGAACGCCTCAAGAAAATTGATG AAGCAAAAGAGAGGGAAAGAGAAAAGGAAAAATTAGCTGTGGATAGAGCAATTCGTGAAGCTCGCCATCGGGCATTTGCTGAAACCAGAGAGAGGGTGGT TCAAGAGAGAGCTGCAGCTGAAGCTCGTCAGAAAAAAAAATCTGATGGACGAGAAGGGCTTGGAAAAACCATTGGCCATGCAAATGAGAAAAAACCGGCT GAGAAGGCTGCTATGGAAGCAAAACTTAAAGCTGAACGTGCTGCTGTTGAGAGAGCAACTGCAGAGGCACGAGCACGTGCGCTAGAAAGGGCACTGTCTG AGAAGTTTGCTTCCGAATCAAGAAATAAATCTGATAAGTCTGTTGCAGAGAAGTTGTTTGGTGCTTCTAGAGATAATGGAATGAAGCAAAATTTCCATTC AAAATCTTTCAGCTATGGAGTCCGTGATTCTACTGATGTATTTGACGGAGCTAATGGCGATTCTGCTCAGAGATGTAAAGCTAGGTCTGAGAGACATCAA AGAATAGGAGAACGTGTGGCAAAGGCTCTTTCAGAAAAGAATATGCGTGATCGACTAGTGCAGATGGAGCAAGAGGAGAGAAATAGGATAGCAGAAGCTC TTGATGCTGATGTCAAAAGGTGGTCAAGTGGGAAGACTGGAAATTTGAGGGCATTGCTTTCAACATTACAATATATCCTTGGTCCCGATAGCGGATGGCA GCCGATTCCTTTAACAGATATAGTAATGACCTCTGCTGTAAAGAAAGCTTATCGTAAAGCTACTCTTTCCGTGCATCCTGACAAGCTACAGCAGCGGGGA GCAAGCATTCAACAAAAGTACATTTGTGAGAAGGTTTTTGATCTCCTAAAGGAAGCTTGGAACAGATTCAACATGGAGGAACGATAAACAATTCCCAGTG TTGCCTAATAACAATGTGTATGCTGGGTACAATTCTCTCAAGTGTATTTGTTAAATGATAAGTGTAATTTAATATATGAAAGAATTCATTAAATTAGGAT ATTAGGATATCAGCAAAGTAGGATGGCATGCAAATGGACCCTTTAATATATAGCTCATTTTCTACCGTTTTCTTCATTTACTCTCATCATAATTCATAAG TATGTTATTGAAATTATAAGTAGACAATTATTTCAAAATGGAGTTACAAGATACTAAGATAGTGTTTGGGATGTTCCCTTGGTAAAAAA
• Tissue: pods
• Gene name: LI_gene_189295;
• Additional information: details;

Expression of Ll_transcript_471813

FPKM

• PAB: 0
• PNAB: 6
• PS1: 11.5
• PS2: 4.6
• PS3: 7.4
• PW1: 7.5
• PW2: 8.1
• PW3: 6.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_471813

• Blastp: Auxilin-like protein 1 from Arabidopsis with 54.94% of identity
• Blastx: Auxilin-like protein 1 from Arabidopsis with 75.17% of identity
• Eggnog: UBA TS-N domain protein(ENOG410YGT5)
• Kegg: Link to kegg annotations (AT1G75310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458164.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;