Ll_transcript_471826

• Id Trinity: TRINITY_DN52007_c2_g4_i5
• Name Transcript: Ll_transcript_471826
• Sequence: TTGATGTATTCCTCATCCATTCCCAAAGTTGGCTATAGAAGTTTTATTAATTTAGCCAAATATAAGAGAGCAAAGCCAAGGGAGGAAACCAATCTTGCAG GGAAGATCCCACTAAATATTCAAAGGAAAATCCGACACTATTGCGGTCTTCCAATGATACCAGCAGGATCAATATGTCATATCTTATGGTTAACCAGGGA AGTGATGTAGCTCAAATCCATGCTGTCCCTGCTTATACGTGTTTAATTGAAGAAGTCAATCCTGTGAAGGTGAACAGAGACAATCCTGTGAAGGTGAAAA GAGACAATCCTGTGAATGTGAACAGAGACAATCCTGTGAAGTTGAACAGAGACAATAAGTCTGTACCAGGAACACATGATGATTGTTCCGGTATTCATTG CAATGAGGGGATAAAGGAAAGTGGATGTTGTAGTAAATCATTATCTGATCCTTCACCTGATAATACTAAGAAACAGTCATCAAACAATGAAGTGAACGTT AAAAATAGATCTGAAACTATTGACATGTTTTTTGATGCATCTAAGATTAGCAATGGAAGTAAAGGAGCACATCACATCAAAATTCCTCCATTTGAGACTG TGGCGGGTAACATGGATTATCACAACGATGAAGCTGCGAGATCCACGGCAACCCAAGGCCATGCATCCAAAAGAGACAGATCTGAAGGTGCTGATTCACC GTCATACTTAGATGACATTGTAGACTCAAATTCAGAGGCAGCTACTTCTGTAGCTGCTTTAAGAAAGGCAATAGAAGAGGCTCAAGTAAGAATGAAGGTT GCAAAAGAATTAATGAGAAAAAAAAAAGAAGGTTTTCCTAATTTTGTGAAACGGAAGTCTAATATTGACTCTAAAGCTGAGAAAAAAGAGGATAAAATCT CATGTAAAACATTGAGCCTTGAAGAGATTAATACGAGGCAAACATTTGGAGAAATGGATGCTTTGACAAAGTTTTCTTATGAGGTAGGAAAGCCAACAAT GAGAATGGAGAAAGTAAGATCAGATCTTGGGGCGAAAGAAATGTTAGTTGCTGAAGAAGCCATTCAAGCAACACTGAAGACATTGATATCAACTCAGGAA AAACATAAGGAAGAGTTTGAACAAAAAGAAGCAGATGATAATGCAAAAGTTATCGAGCTTAAAGAGTTAGAAAATAATAGGAAAGAGCCATGTATTGAAA ACACAGGTAGGAATGCCTTTGACAAACCAGAAGAATGTGATCATACAATAGAAGTGATGAAGGAGTACCGGAAAGATGAAAACAATATAGAGAAGGTTCA TGCAGCTAATGAAGCAAGTGCATGTGAAGAACTTGTTGTTGAAGCGAGACATACATATCAAGAAGTTGTAGATGAAACAAAACTGGTTCAGAAGACGTTT GATAGTGGAGCAACTGACAAGAGATTGAGGGTAAATGAAGAAGAGGAAGTTGAGAACAAGGTGACACCTTTCCATGAACCAGCAAACTGTGAAAGCAACC TGGGTGAGCAGGAGTTAGTACGAAGAGATGAAAACAAAGTTGCCTGTAAGCCAGAAGATGGGAAAAAGATTGAGGGGCGGAAAGAATGTCAAAGAAATTT GAGAGCTATTCATGAACTCAAAGAGGTTGAGAGGAACATTGATCAAGAGCAAAAAGGAAATGAAGAGAAAGTTGAGGTGTCCAGTGATCCGGAAGAATGT GAGTTGCCAGAGTTTGTCGAGCCAATGGACAAGAGAGCATGCAGTCCACATCACCCAGACTTCAATAGTTTGGAGAGAGAAATAGAGAACTTGGGGTCTT TAGATGATATAAAGAGAAGTGACGAAACTGGTTTTCTAGATGTAAATCGAGAGGCAGAACATTCCTGTCAAAGGGAAGGCACCAAGAGTACAGTTAGCAA TATCTATGTGCATGAAATGCTAGAGCAGACTGTGGACCATATTCATGATGAGGAAGACATTTATTTAAGAATTACTCAGGATACTGAATTAGATGCAAAT GAGAGCGTTCAATATTCCAAAGCAAGTAAGAAGGAAATTGAAGGAGCCACTTCTCTGATGGAAGAAAATGAGGGGGGACGGGAAGATAACAAGGAGCCTG TAGAAGTAATTAGAGTGAGTCAAACTGATTCCAACTATGAGGATATAAAAGCAGAGGAAATTGGCATGACTATAGGAACCAGTTCTAGTTATGAGCCAGG TGAAATTGAAAAGTGGAGCAAAACTCAGGTTTGTGACACTACTGTTGAAAATGACGAAACTGTTGAAGTAACTCCAGCAGTTTATTCATATGATGTGCAA GATGATATAATGGAAGCTAGTGATGCTTCATTCGGACTTCAAGAGAAGTATGACGAACCAGAATCTGTTCAAGAGACAAATGATTTCTATGAGAAAATTG CAGTTGAGACCTCTGCCTTTGTTCGATGTGCCCCTGAAATCAATGAAACAGTTAATCCAATGCAAAGTAGAAGTGAAACTGTTACCTTTGAAAGTGATGC TACATATTTTGCTGAAACTGACATGAAGGCTAGGAAAAATCAAGATCAGTGCATGGAAGAAGCAGAAAATCACTGCAACCCGCTAATGCTTAGTGAAGAG ACAACTACCGAGTGTATAAAAATCCGTGAGGATGCAAAGGAGGCTAGTGTTTCTTTAGACGAAGAGATAGATGAAAATCGATCTAACTCCTCTAACGAGG AAATTTTGTTTGACAATGAACACAATATAGAAGAGTCTCAGGTAGTTACTATGTCTGGAAGGATATCAACCCCCTTTAAAGAAGAGGGTATTGAAACAAT TCACAGCAATCTAGAGGAGAACCATCAAGCAGGCACGGCAATGGAAGAGAAGGAATCCAATGGCAACCTACAGACAGTAGATCTGGAAAAGGAACGCCTC AAGAAAATTGATGAAGCAAAAGAGAGGGAAAGAGAAAAGGAAAAATTAGCTGTGGATAGAGCAATTCGTGAAGCTCGCCATCGGGCATTTGCTGAAACCA GAGAGAGGGTGGTTCAAGAGAGAGCTGCAGCTGAAGCTCGTCAGAAAAAAAAATCTGATGGACGAGAAGGGCTTGGAAAAACCATTGGCCATGCAAATGA GAAAAAACCGGCTGAGAAGGCTGCTATGGAAGCAAAACTTAAAGCTGAACGTGCTGCTGTTGAGAGAGCAACTGCAGAGGCACGAGCACGTGCGCTAGAA AGGGCACTGTCTGAGAAGTTTGCTTCCGAATCAAGAAATAAATCTGATAAGTCTGTTGCAGAGAAGTTGTTTGGTGCTTCTAGAGATAATGGAATGAAGC AAAATTTCCATTCAAAATCTTTCAGCTATGGAGTCCGTGATTCTACTGATGTATTTGACGGAGCTAATGGCGATTCTGCTCAGAGATGTAAAGCTAGGTC TGAGAGACATCAAAGAATAGGAGAACGTGTGGCAAAGGCTCTTTCAGAAAAGAATATGCGTGATCGACTAGTGCAGATGGAGCAAGAGGAGAGAAATAGG ATAGCAGAAGCTCTTGATGCTGATGTCAAAAGGTGGTCAAGTGGGAAGACTGGAAATTTGAGGGCATTGCTTTCAACATTACAATATATCCTTGGTCCCG ATAGCGGATGGCAGCCGATTCCTTTAACAGATATAGTAATGACCTCTGCTGTAAAGAAAGCTTATCGTAAAGCTACTCTTTCCGTGCATCCTGACAAGCT ACAGCAGCGGGGAGCAAGCATTCAACAAAAGTACATTTGTGAGAAGGTTTTTGATCTCCTAAAGGAAGCTTGGAACAGATTCAACATGGAGGAACGATAA ACAATTCCCAGTGTTGCCTAATAACAATGTGTATGCTGGGTACAATTCTCTCAAGTGTATTTGTTAAATGATAAGTGTAATTTAATATATGAAAGAATTC ATTAAATTAGGATATTAGGATATCAGCAAAGTAGGATGGCATGCAAATGGACCCTTTAATATATAGCTCATTTTCTACCGTTTTCTTCATTTACTCTCAT CATAATTCATAAGTATGTTATTGAAATTATAAGTAGACAATTATTTCAAAATGGAGTTACAAGATACTAAGATAGTGTTTGGGATGTTCCCTTGGTAAAA AA
• Tissue: pods
• Gene name: LI_gene_189295;
• Additional information: details;

Expression of Ll_transcript_471826

FPKM

• PAB: 2
• PNAB: 15.7
• PS1: 24.2
• PS2: 12.2
• PS3: 17.4
• PW1: 16.1
• PW2: 13.7
• PW3: 10.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_471826

• Blastp: Auxilin-like protein 1 from Arabidopsis with 54.94% of identity
• Blastx: Auxilin-like protein 1 from Arabidopsis with 75.17% of identity
• Eggnog: UBA TS-N domain protein(ENOG410YGT5)
• Kegg: Link to kegg annotations (AT1G75310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458164.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;