Id Trinity | TRINITY_DN52014_c1_g1_i1 |
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Name Transcript | Ll_transcript_472594 |
Sequence | CCAGAAGTTTATTTTTTAGACAAAACATTGATAAGTTGTTGCTTTAAGGCACTGGTTAAGTTTTTATTGATAATCATAACTTTTTGAATTTTAATGTATT ATTTACATTTTTCTAATAACATACTAGCATTGGAGCTGCAGCATAAAAAAATTTCTTTCCTTATATAAACCAATTTGTTTGTTAATTTTAATTAAATTTC TTTCATTATTTGTGAGTGCCAGAAGATAGTTTTCATTAACTTTGATATTTTTTCTTAGTTCTAATGTTTTGGTTGCTTTGATTGCAGTGAATTTGCTGAT ATATTTGATCTGGAGCACTTCAAGAGAGTACTTGCAAATGATGTGGTAGTAGTTTCAGCATTGCCATCAACACACTTAATGGCGAAGAAAGTGGAGGGAA GCCCTCCCCTCCATGTCACTCCTAGTTGGATCCGATCGCGCTATCTCAGAAGATTAAACAAAGAAGGTGTTTTGCTTTTACGTGGCTTGGACTCAAGGTT GTCAAAGGATCTTCCTTCCGATCTTCAGAAGCTTAGATGCAAGGTTGCTTTTAATGCATTAAGGTTTGCGAAGCCGGTTCAGGAACTTGGTGACAAGATT TCAGAGAGAATGGCAAGCAAAGGGCCATACCTTGCTCTTCATCTTCGAATGGAAAACGATGTCTGGGTGAGGACTGGTTGTCTCCCCGGTCTGAGTCCTG AATTCGATGAGATTATAACTAATGAGAGGATACAACGGCCGGAGCTCTTGACTGGAAGATCAAACATGACTTACCTTGAAAGGAAAATGGCTGGTCTTTG CCCATTGAATGCTATGGATGTTACCAGGCTACTTAAAGCTCTAGGAGCTCCGAAAAATGCAAGAATTTATTGGGCTGGAGGACAACCATTGGGTGGAAAA GAAGCATTGCTTCCATTAGTCCAAGAATTTCCTCATTTTTATAGTAAAGAAGATATTGCCATGCCGGGAGAACTAGAACCATTTTCGAAGAAAGCATCTA TAATGGCTGCCATAGATTACATAGTTTCTGAGAAGAGCGATGTTTTCATGCCATCTCATGGAGGAAATATGGGCCATGCTCTTCAGGGTCATCGGGCATA CGCCGGGCACAAGAAATATATAACCCCAAACAAACGACACATGCTCCCCTATTTTTTGAATTCTTCCCTCCCTGAAGAAGAGTTCAACAGGATTGTAAAG GAATTGCACCAAGACGCGTTGGGGCAGCCGGAACTCAGGACTAGCAAGGCTGTGAGAGATGTCACCAAGTACCCTATCCCCGAGTGCATGTGCAATGACT CGCATGCGATTTCATGATTGCAAATTGATTCCAAAGCTTCTAACATGAAGGTTAGCAATGAACATGGAAGTGACTCTGCTATTTTGGAAGGAATTGACGA TTTTTGAAATGTGTTTCTGGGCAACCGCGGTAAGTTCAAGGCGCGGATTTTTAATACATAGCATGTCAAGCACACATCTCTCTACAGGTGTGCTCATTGT ATTCCCTTAAATATGCTTAATATGGATGTGAGGCAATGAAGATTTCAATCATCATTATATGATAGATTTGAAATAATACACAACAGAAGATCATTCATTG GTTCTTTATACAAAGAGATTGTATAGGATACATGTTCCCTTTATCTGTGTAATTCTTTGTACTACATTATGAAGGCTCGTCAATATTTGTATAAATTATA ATAATATTATATTTTAGTCATTTTTTAATCTTCAAGATCACATTATCCAATTCAGCAATAAGAGTTTAAAACAGG BLAST |
Tissue | pods |
Gene name | LI_gene_189359; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_472594
Blastp | Uncharacterized protein At1g04910 from Arabidopsis with 28.62% of identity |
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Blastx | Uncharacterized protein At1g04910 from Arabidopsis with 29.36% of identity |
Eggnog | DUF246 domain-containing protein(ENOG410Z25U) |
Kegg | Link to kegg annotations (AT1G04910) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443596.1) |
Pfam | GDP-fucose protein O-fucosyltransferase (PF10250.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |