Ll_transcript_472598

• Id Trinity: TRINITY_DN52014_c1_g3_i2
• Name Transcript: Ll_transcript_472598
• Sequence: AGCAAACAGAAAAAGCAATAGTAGCTTCCCTCTCTCTCTCTCTCTCTCTGGTTTTCTTTCTTTGTAGATGGCAAAGTGTAAGAATAGTTCAAAGAAGTTA TCATACATCTCAGTTCCTTCTCAAATCATCAATTCCATTTCATCTTCTTCTCTTCAATCTCTTCTTGATTCATCTTCAACTTCAAAGAAGTCTGCAAGAA ACACCTTCAAGATCTACAGGAACCCAAGACTATTCTTTTTCACTCTGTTTCTCCTTTCTCTCCTTGCCTTCTTCAAGTTTGGTTCCAATCTAGATATCCC TTTTTCTCCCTACCCATGTGCTATAACAACCTTGCCACAGTTCAAAGACTCATATTTGCATTCAAAATCCAATCTTGGGGTTGTTTCAAATGTTGGGTAC TCAGCTCATGATGCAAAGGAAGATGAGGTTTTGAATGGTGGTGGTGATGATAGTAGTGTGTCATTGTCAGAGTCTCTATTTGCCAATGTGCAATTGCAAG CACAAGGACCAAGTGGATTTGAAAGTGGTGAGGAGGTTGAAAAGGGTGAGTTTTGGAAACAACCAAATGGGTTGGGGTATAAGCCTTGCTTGGGTTTTAG CAGGGATTATAGGAGAGGGAGTGAAGGGGTTTTGAGGGATAGGAGAAAGTATTTGATGGTGGTGGTTTCTGGTGGGATGAATCAGCAGAGGAATCAGATT GTTGATGCTGTTGTTATTGCTAGGATTCTTGGTGCTGCTTTGGTTGTCCCTATCTTGCAAGTCAATGTCATTTGGGGAGATGAAAGTGAATTTGCTGATA TATTTGACATGGAGCACTTCAAAAGTGTTCTTGCCGATGATGTAAGAGTGGTTTCAGCATTGCCATCAACACACTTGATGACAAGGCCAGTGGAGGGAAG CCCTCCCCTTCATGTCACTCCCAGTTGGATCCGGTCGCGCTATCTCAAAAGAGTAAGAGTTTATCTCTCTTGTGATGTTCTATTTATGCCTTGAGCTTAC ACCAGGCCATATTTAGTAGATGATAGGTTTTTAGCTTCTCCAGGTTGTGATCCAATCTGTTGCCTGTAATATAGACTTTGTTTGGTTTTGTAATGATTTC ACCTATCGTCATTTCATGGATGAAAAAAGTTGTAGTGTTTTACATGTGGTAATTAGAGCCCTCCATGTGTGAAAAGAAGTCTGAAATAATTTCACTTATG GTAATTAGCTTGTATCGAATCCTCAATGTTAACTGAGGAAAGGTTTGATTTGTAATGAAAAGTGGGCAGTGAGCATTGTTCTTGTTCGAATAGAGATTAA CATGATCCTTGTTGCCCTATGCAGCTCAACAGAGAAGGCGTTTTGCTTTTACGTGGCTTGGATTCAAGGCTGTCAAAAGATCTTCCTTCTGATCTCCAAA AGCTTCGATGCAAGGTTGCCTTTAGTGCACTAAGGTTTGCAAAGCCAGTTCAGGAAATTGGGAACAAGATTGCAGAGAGAATGCAAAGCAAGGGACCCTA CCTTGCTCTTCATTTGCGAATGGAACGGGATGTTTGGGTGAGGACTGGTTGTCTACCAGGCCTGAGTCCCGAGTATGATGAAATTGTAAACAATGAGAGA AAGCAACGGCCAGAGCTTTTGACGGGAAGATCTAACATGACTTACCATGAAAGGAAGCTGGCTGGCCTGTGTCCCTTGAATGCTATGGAGGTTGCCAGGC TGCTTAAAGCTCTAGGAGCTCCGAAAGGTTCAAGAATTTATTGGGCTGGAGGACAACCATTGGGTGGAAAAGAAGCCTTGAATCCACTAATCAATGAGTT TCCACATTTTTACAATAAGGAAGATCTTGCCTTGCCTGGAGAACTAGAATCATTTGCAAAGAAAGCTTCTCTAATGGCTGCCATAGATTTCATAGTCTCG GAGAAGAGCGACATTTTCATGCCATCTCATGGAGGAAACATGGGCCATGCAATTCAGGGTCAACGTGCCTATGCTGGACACAAGAAGTATATAACCCCAA ACAAAAGACAGATGCTGCCATATTTCATGAATTCTTCCCTACCTGAAGCAGAGTTCAAAAGAATTATCCAGGAATTGCACCAGGACTCGTTGGGGCAGCC GGAACTACGGACTAGCAAGGCTGGGAGAGATGTAACCAAGTATCCTGTCCATGAATGCATGTGCAATGACTCACATTCTCATTCCTAACTATCAATGTAA TACCAAAGCTTCTTGCATGAAGAGTGCATGGAAGTCGATGCCAGAACATGGACGATTTTGATCCCTTGGGAACGACCTGAGGTGACTTTTGAAGGGAACA ATCGCAGAACCAATTTTGAAGAGCTATAATGCACAGCACGCCTCTCCCCACAGGTGTATCGACATTATTCCTTAAATATGATCAATATGTATGTAAGGCA ACGTAGTTGATCCCCTGACTGAAATCATATGCAACAACAAATCATCCTTTGATTCTTTATACAGGTCATTCTTTGATTCTTTATACATATTACAGAGTTC TTATAGGGTACACATGTAATCTTGTTCAGTATAATTCTTTGTAGCACATTATACAGGCTTGTGCATATGTATAGATTTCCACTTTTACATTCTAGTTACT TGATAAATCAAGATCACCTTATGCTACCACTCAGAATTAGAAGAAACTGAAGACATGATTAGAAGAAAATCAAAATCACTTTATGCTACCACTCGAATTA GAAGAAACTCGAACCAGTTGTCATTTTATTGCTTGTGGTTTTTTTTTATGGTTGCGAATCAGCCACAGGAAGTTATCGAGTCTGTGTTTTCTAGAAGCAC ATAACAAAGGGTGTATCATTATTATATTTGAGGTGTAACATTCATTTTAAGGCACACTTGCGATTTCTCATAACACAATTGAAAATTGCATGTACCTTGA TGTTGAATACTTTTTTGGCAGGGTATGCATCTATTATTGCCAAACTAACTGGTCCAGCTCTAAACCTAATTCTGTCAACTTAGCTGAGTCATGATCATAT CTAAATGTTAGCTGATACTTTGCCCAATGTTCTGGCTAGAGAGTTTGGATTACTTGACATCATCAGCACTAGCTGTTCCCCATAAGGTAAGCTATATTAG CATATGCAAATGCTTAAGATCTGTTTCGAAGTTGAGTTTTGGAGGGGAAAGAAAGGTTTTGGAGTCATATCATAAGTGTATGTACCTTTCATTTTCCC
• Tissue: pods
• Gene name: LI_gene_189361;
• Additional information: details;

Expression of Ll_transcript_472598

FPKM

• PAB: 0.6
• PNAB: 0.2
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472598

• Blastp: Uncharacterized protein At1g04910 from Arabidopsis with 33.33% of identity
• Blastx: Uncharacterized protein At1g04910 from Arabidopsis with 29.12% of identity
• Eggnog: DUF246 domain-containing protein(ENOG410Z25U)
• Kegg: Link to kegg annotations (AT1G04910)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433124.1)
• Pfam: GDP-fucose protein O-fucosyltransferase (PF10250.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;