Ll_transcript_471645

• Id Trinity: TRINITY_DN52015_c1_g4_i1
• Name Transcript: Ll_transcript_471645
• Sequence: GATTTGTTTTGATTATATATATAGTTAGTGGTGATTGATGATATAGTCATAATCCTAGGCTGTTTGTCGTTACTCACTCGCTCATAATCTAAACTTCACT TTCATTCTTTCATTCATTCAGAGATGGCTTTTGCTGCTATAGTTCGTAGGAAATTCACAACACATTTCAAGCTTCCATCTTTATGTTTCACTAATCAATT ATTCTCTCTCAATTCTCAAACCCAAAAACAAGTTTTTTCCTTTCACACTGAATCCACAAGTTCTGGTGGTGATGGATTACCATCTTATATGCGTGGAGCT GTGTTTTGGGAACCCAATAAGCCTCTCACCATTGAAGAATTTCGCATGCCTCGCCCAAAAGCTGGTGAAGTCCTCATCAAAACCAAAGCCTGTGGAGTTT GCCACTCTGATCTGCATGTTATGAAAGGTGAAATTCCCTTTTCGAGTCCTTGTGTTGTGGGGCATGAGATAACTGGTGAAATTGTTGAACATGGACCCCT CTCAGACCCCAAAACTGTAGAAAGGCTTCCACTTGGGTCTCGGGTTGTCGGGGCCTTTATCATGCCTTGTGGCAACTGCTCTTATTGTTCAAAGGGGCAC GATGATCTATGTGAACCTTTCTTTGCTTATAACAGGGCTAAAGGAACCCTCTATGACGGTGAAACTCGACTATTTCTTCGAAGCAATGGAAAACCAGTGT TTATGTATAGTATGGGAGGGCTTGCCGAGTACTGTGTTGTGCCAGCAAATGCAGTGTCAGTATTACCAAAATCATTGCCATACAATGAGTCTGCAATTCT TGGATGTGCTGTTTTTACTGCTTATGGTGCTATGGCTCATGCGGCCCAGGTACGTCCTGGTGATTCTGTTGCTGTCATTGGAACCGGTGGCGTTGGCTCC AGGTAACCAAAACAACTTTCGAATGCGTGTTACACATTTAAATCCCCACTTAGCTTAGCCTTTTGCTATTTTGTAGTCTTCAGAATATTTAATAAAGACA CATTAGGTTAACATCTACTAGTTTATTACTGTCTTAAAAACTCTTAAGATTAAGGAGACAATAAAGACAAACTAATAGTTTTTGCATGTAGCTCGTTGAA CCTCAGTTATATTGCAATGCCCAAGTGTTTGCATTTTTTGGTAAACGTGATAAAACCATTCATGATCCTTTGCCTTAAGGGATTAAGCTTTTGAGAGAGG CAGTGTTTTGACACGGTATTAAATCCTTACTCAGTTGGGAGAGGTAGTCTTCTAAATAAAAAGTTGAGTTTAACACAAGATAGGGTGGGTTATGCATTGT CCGTGATTCAAGCTCAGTAGGCTGTTTCATGCGGGACATGTTAGCTATAAAACCATTCAAGAGTTTTCGTCTAAACAGATTAGGCTTTCGGAATAGTTTG TGGTTGACAGTAACCATGTCATTACATCTGCTAATTACTATATGATCACAATTGATACTGTGTTTGTTACATTTAATGCTTTTTGTATGGCTTGTTGAAA ATTTGTGGGAGACTAGACATTTAACTGTCTAATATTTGTGAAAAACTTCTTACGTATTAGGTGAATGAGAATTTGAGAAGATCTGTATAAATTGTTCTAA CTCCTTCGTTGCTAGAGTTTTGGAGAACTTCAGTTTATTTGATATAATCATTTACGTTAAAACTGAGAATATATAGCTTTCATAATTATACCATTTATCA GGACAGTTGGCTCTAATGAAATGCAGCTGTTTTCTTTTTTAACTTTATCTCCCATTCCAGTTGTTTGCAGATAGCTAGAGCATTTGGCGCCTCGGATATA ATTGCCGTAGATGTTCAGGATGAAAAGCTACTGAAAGCAAAGATATTTGGTGCTACTCACACTATCAATGCAGCAAAGGAAGATCCCATTGCAAAGATAT TGGAAATTACTGGTGGGAAGGGTGTTGATGTTGCTGTGGAAGCGCTGGGGAAACCACAGACATTTTCCCAGTGCACGCATAGTGTTAAGGATGGAGGAAA GGCCGTGATGATTGGACTGGCACAAGCTGGTTCAATGGGAGAGATGGATATAAATCGGCTAGTTCGTAGAAAGATACAAATTATTGGTTCATATGGAGGC CGAGCAAGACAGGATCTTCCAAAGTTAACTAGATTGGCAGAAACAGGTATCTTCAATCTTAGCGATGCTGTTTCTAGGACGTACACCTTTGAGGAGGCAG ACAAAGCATTCCAAGATCTCAACGAAGGAAAAATTGTCGGTCGAGCTGTGATCGAAATAATGTAGGTCCTTATTCCATGTGATGCTTTTCTGCTTCCACA GTTCCGCTTCTGGCATGGTCTACTGTGTTTGCTTTGAATTTGCAAGGTGTGGGTTCCCTGAGAACACAGATAATAAGAACTAGCTTCAGCTACTTGTTCA AATAAAAATTGTTTCTTTGGATTTGCAAGTTTATGTAATAATTTTTCCATGTTCATACATAAGCATGCCAATTATATTTGTTTTAGCTCCTTGTTAACCA TTGTCGCATGGGCGAGATAGCTGCTGCTATCCCACAAGTTACTAATTGTAATAATTGGCAAACAAGTAACATTTCTTATCACTAATTATTAGATGTGTAA AATAATTGACCAAACAGCTAAAGTGGTATCAATAATTGTTTTTCCATGCACACAGCATGATAATTTATTGACGGTCCTTGTTGGTGGGGTTTCGATAGTT TCTTATGCAAAACACTAAGTTCAGGCATGTTGAAGAGGTGTTTGAGATTCGGGTAGTGGTGATGGTGAAGTTGGCGATGAGTCCAAGGAAGAGGGTGAGT TTCAAAATTTTGCAAAGAGAGGCCTAAAATTTGCAAATAAAAGCCTTAAAAATGAGATGCATCATGCTCCCCACTCCATGGGCAACATATCAGACAGCGC CTCCAAACATGGCATTATGTTACTAGGTTTTATCTGTTTGAAGGTGGATTTGAGACCACCTACTCTTCCTTCAACTTGTTAGCATATCTGAGGAAAGCAT TGGCAGGGTTTTGCCAAGGTGGAGCCCGAACACGAGTAGACCTTCGAACCACAGACTCATCCACTTCAACCTTGTGCATCAAATCCTTCGATCTTTTCTG GAGTACCAAGCTGTAAACAGACAATGGAAAAGAAAAACAGAATTACTAAAGTGAACCTTGAAGCAGCTTTAGAATTTCACTATTCCAAGTGCTTCAAGAG TAATGTCTGTTTAATACGCTCCTACCAACTACTGCTACTACAGCATAAGTAAGTTTACACAACAACAAAATCTAAATAATAGTATCTTCTGTAGTTCTCT GCATTTTCCATACTTTTGCTAACTCCCCCATCTGAACCGTTTTTCTCTGAATTGCACATACGTAGGTGTGTTTTACAGAGTGGTACTTATTTAAGGATAC TAAGTTTGTGCTCATTCTATAAGAACAGCACCTGAATGGGAAACAACAATGACTGCAATGACTTAATTATACTATGATGATAATTAATATATCCACAGAC ATATTAAAT
• Tissue: pods
• Gene name: LI_gene_189370;
• Additional information: details;

Expression of Ll_transcript_471645

FPKM

• PAB: 0.4
• PNAB: 0.2
• PS1: 0.6
• PS2: 0.3
• PS3: 0.5
• PW1: 0.6
• PW2: 0.5
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_471645

• Blastp: Succinate-semialdehyde dehydrogenase (acetylating) from Metallosphaera with 43.01% of identity
• Blastx: Succinate-semialdehyde dehydrogenase (acetylating) from Metallosphaera with 43.01% of identity
• Eggnog: alcohol dehydrogenase(COG1062)
• Kegg: Link to kegg annotations (Msed_1424)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432415.1)
• Pfam: Alcohol dehydrogenase GroES-like domain (PF08240.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;