Id Trinity | TRINITY_DN52015_c1_g4_i2 |
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Name Transcript | Ll_transcript_471649 |
Sequence | GATTTGTTTTGATTATATATATAGTTAGTGGTGATTGATGATATAGTCATAATCCTAGGCTGTTTGTCGTTACTCACTCGCTCATAATCTAAACTTCACT TTCATTCTTTCATTCATTCAGAGATGGCTTTTGCTGCTATAGTTCGTAGGAAATTCACAACACATTTCAAGCTTCCATCTTTATGTTTCACTAATCAATT ATTCTCTCTCAATTCTCAAACCCAAAAACAAGTTTTTTCCTTTCACACTGAATCCACAAGTTCTGGTGGTGATGGATTACCATCTTATATGCGTGGAGCT GTGTTTTGGGAACCCAATAAGCCTCTCACCATTGAAGAATTTCGCATGCCTCGCCCAAAAGCTGGTGAAGTCCTCATCAAAACCAAAGCCTGTGGAGTTT GCCACTCTGATCTGCATGTTATGAAAGGTGAAATTCCCTTTTCGAGTCCTTGTGTTGTGGGGCATGAGATAACTGGTGAAATTGTTGAACATGGACCCCT CTCAGACCCCAAAACTGTAGAAAGGCTTCCACTTGGGTCTCGGGTTGTCGGGGCCTTTATCATGCCTTGTGGCAACTGCTCTTATTGTTCAAAGGTATTG TTGTATAAGACACTCAACTCTTTATGTTAACTGAATTCTTGTTCACCCATGATGTTATCTATACAGGGGCACGATGATCTATGTGAACCTTTCTTTGCTT ATAACAGGGCTAAAGGAACCCTCTATGACGGTGAAACTCGACTATTTCTTCGAAGCAATGGTTAGTACCATGTACCTATGGTTCTCAAGCCTAACCATAA TTATTGCTAATTTGATAATACTGCTACCAGCTGCAGAAGCTGTGGTATGAGTTAAACATTATTCTGAAGACTTATAATTGAATTTAGTTCTTTATTTCTA TAGACAAAACCATTAAGAAATATTTAGATGTAAATGGTTTGTTTATAAACATGATTTTATAAGTCATTATGCAGTTCTTCAATTGATATAGCAGATCAAC TTAGTGGGAAAAGACTTGGTTATTATTGTTCTTGTCTTCGTTTCTTTATCTATTTTTTAATCAGCAAACAACCACTAACACCTGCATTACTTTTTACACG ATGCAAATATTACTGATCTCACGAAGCACTCAGCACAGTGTATTAATCTCCTTTTTCTGAAATAAATAAATGTTCTCAATATATCCATCTGCAGAAGATT GTTCGAAACTAATAGCGCCTTATAACTTCATAGTTCATACTAAGGGCACATGTCTATCATTATCCGTTTCCTCCTTTATTGATGTTTTAATTTTCAGCTG CTATATATTTCGTTGTTCTTCAAGGGTATTTATCTCTAGTATTAGAATCCTTCATTTTTGGAAGACTGAAAATTCTCTGCAATTTATAGGAAAACCAGTG TTTATGTATAGTATGGGAGGGCTTGCCGAGTACTGTGTTGTGCCAGCAAATGCAGTGTCAGTATTACCAAAATCATTGCCATACAATGAGTCTGCAATTC TTGGATGTGCTGTTTTTACTGCTTATGGTGCTATGGCTCATGCGGCCCAGGTACGTCCTGGTGATTCTGTTGCTGTCATTGGAACCGGTGGCGTTGGCTC CAGGTAACCAAAACAACTTTCGAATGCGTGTTACACATTTAAATCCCCACTTAGCTTAGCCTTTTGCTATTTTGTAGTCTTCAGAATATTTAATAAAGAC ACATTAGGTTAACATCTACTAGTTTATTACTGTCTTAAAAACTCTTAAGATTAAGGAGACAATAAAGACAAACTAATAGTTTTTGCATGTAGCTCGTTGA ACCTCAGTTATATTGCAATGCCCAAGTGTTTGCATTTTTTGGTAAACGTGATAAAACCATTCATGATCCTTTGCCTTAAGGGATTAAGCTTTTGAGAGAG GCAGTGTTTTGACACGGTATTAAATCCTTACTCAGTTGGGAGAGGTAGTCTTCTAAATAAAAAGTTGAGTTTAACACAAGATAGGGTGGGTTATGCATTG TCCGTGATTCAAGCTCAGTAGGCTGTTTCATGCGGGACATGTTAGCTATAAAACCATTCAAGAGTTTTCGTCTAAACAGATTAGGCTTTCGGAATAGTTT GTGGTTGACAGTAACCATGTCATTACATCTGCTAATTACTATATGATCACAATTGATACTGTGTTTGTTACATTTAATGCTTTTTGTATGGCTTGTTGAA AATTTGTGGGAGACTAGACATTTAACTGTCTAATATTTGTGAAAAACTTCTTACGTATTAGGTGAATGAGAATTTGAGAAGATCTGTATAAATTGTTCTA ACTCCTTCGTTGCTAGAGTTTTGGAGAACTTCAGTTTATTTGATATAATCATTTACGTTAAAACTGAGAATATATAGCTTTCATAATTATACCATTTATC AGGACAGTTGGCTCTAATGAAATGCAGCTGTTTTCTTTTTTAACTTTATCTCCCATTCCAGTTGTTTGCAGATAGCTAGAGCATTTGGCGCCTCGGATAT AATTGCCGTAGATGTTCAGGATGAAAAGCTACTGAAAGCAAAGATATTTGGTGCTACTCACACTATCAATGCAGCAAAGGAAGATCCCATTGCAAAGATA TTGGAAATTACTGGTGGGAAGGGTGTTGATGTTGCTGTGGAAGCGCTGGGGAAACCACAGACATTTTCCCAGTGCACGCATAGTGTTAAGGATGGAGGAA AGGCCGTGATGATTGGACTGGCACAAGCTGGTTCAATGGGAGAGATGGATATAAATCGGCTAGTTCGTAGAAAGATACAAATTATTGGTTCATATGGAGG CCGAGCAAGACAGGATCTTCCAAAGTTAACTAGATTGGCAGAAACAGGTATCTTCAATCTTAGCGATGCTGTTTCTAGGACGTACACCTTTGAGGAGGCA GACAAAGCATTCCAAGATCTCAACGAAGGAAAAATTGTCGGTCGAGCTGTGATCGAAATAATGTAGGTCCTTATTCCATGTGATGCTTTTCTGCTTCCAC AGTTCCGCTTCTGGCATGGTCTACTGTGTTTGCTTTGAATTTGCAAGGTGTGGGTTCCCTGAGAACACAGATAATAAGAACTAGCTTCAGCTACTTGTTC AAATAAAAATTGTTTCTTTGGATTTGCAAGTTTATGTAATAATTTTTCCATGTTCATACATAAGCATGCCAATTATATTTGTTTTAGCTCCTTGTTAACC ATTGTCGCATGGGCGAGATAGCTGCTGCTATCCCACAAGTTACTAATTGTAATAATTGGCAAACAAGTAACATTTCTTATCACTAATTATTAGATGTGTA AAATAATTGACCAAACAGCTAAAGTGGTATCAATAATTGTTTTTCCATGCACACAGCATGATAATTTATTGACGGTCCTTGTTGGTGGGGTTTCGATAGT TTCTTATGCAAAACACTAAGTTCAGGCATGTTGAAGAGGTGTTTGAGATTCGGGTAGTGGTGATGGTGAAGTTGGCGATGAGTCCAAGGAAGAGGGTGAG TTTCAAAATTTTGCAAAGAGAGGCCTAAAATTTGCAAATAAAAGCCTTAAAAATGAGATGCATCATGCTCCCCACTCCATGGGCAACATATCAGACAGCG CCTCCAAACATGGCATTATGTTACTAGGTTTTATCTGTTTGAAGGTGGATTTGAGACCACCTACTCTTCCTTCAACTTGTTAGCATATCTGAGGAAAGCA TTGGCAGGGTTTTGCCAAGGTGGAGCCCGAACACGAGTAGACCTTCGAACCACAGACTCATCCACTTCAACCTTGTGCATCAAATCCTTCGATCTTTTCT GGAGTACCAAGCTGTAAACAGACAATGGAAAAGAAAAACAGAATTACTAAAGTGAACCTTGAAGCAGCTTTAGAATTTCACTATTCCAAGTGCTTCAAGA GTAATGTCTGTTTAATACGCTCCTACCAACTACTGCTACTACAGCATAAGTAAGTTTACACAACAACAAAATCTAAATAATAGTATCTTCTGTAGTTCTC TGCATTTTCCATACTTTTGCTAACTCCCCCATCTGAACCGTTTTTCTCTGAATTGCACATACGTAGGTGTGTTTTACAGAGTGGTACTTATTTAAGGATA CTAAGTTTGTGCTCATTCTATAAGAACAGCACCTGAATGGGAAACAACAATGACTGCAATGACTTAATTATACTATGATGATAATTAATATATCCACAGA CATATTAAATâBLAST |
Tissue | pods |
Gene name | LI_gene_189370; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_471649
Blastp | Succinate-semialdehyde dehydrogenase (acetylating) from Metallosphaera with 48% of identity |
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Blastx | Succinate-semialdehyde dehydrogenase (acetylating) from Metallosphaera with 39.39% of identity |
Eggnog | alcohol dehydrogenase(COG1062) |
Kegg | Link to kegg annotations (Msed_1424) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432397.1) |
Pfam | Alcohol dehydrogenase GroES-like domain (PF08240.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |