| Id Trinity | TRINITY_DN52017_c2_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_473438 |
| Sequence | CTGTAAGAAAATGATTCTTTACTCATCATTTGACTCATGCTCATATAGTCCCAAACAAAACACTGTTAGAAGAAGAAAACCCAAACAAGTTGAGATTCTT GGGTTCTCGATTTTCCCCCAATTCCGTAAAACCCTAACTTCCCCACTCTCATCTCCTCACAATGACTAGTATTCGTAGGTTGAGTGTTGAAGAATCGCAA TCACTATACTCTCTTCTCAAATCAGAACACCGTCCACTTCATGAGATCGTCTCCGAATTCAACTCCAACATTTCCACCACTCGACACTTCACTCACTGTT CCTATCTCCTCATGCTTTTGCAGGATAATAAGGTACTCAACACTACTCAGCGGTTAATTGCTTTTGCTTTGGTACTTGAGGCATATTCATCCCAGGGATC TGCTTTAAATCCGTTCATAAGTTTCATCTTAAATGCTGCCTGTCACGAAGAGTCGGAAAAAGTTGAGAGGGCATTTATTCTACAGCTATTAGGTGTTGAT GGGTCCAACAGTGGAAATGAGTTTCTTCAACATTCCGCTTCAGATTATGTGAAAGGATTTGATCAGTCATTGCATGATTTTCCACCACTAGATCAGTTGC AGAAGCAGTTTCCTGATCAAGTTCATCTAGAACCATATCTTTACTTACTTAAAGATGGTTCTGTAAAAAATGTAGTCCCAGACCCTGATGTTCCCTCCAA TTGTGATGTAGATTCACCAGAGTTTGATTTGCACCCTGGAATAAAACCTAAAATTGGATCCGGTGATAAAGATGAAGCAGTAGTTGGTCTGTTGTCAAAT CTTTCACTAGAAGGATTAAGTCCTCACTGGATCAGGCCTGTTCCACCAAGGCTCCCAATACTTGATGGGGAGCTTGTTTGGCTAAATCCTGACGACAATC ATGAGCTGATGTGGGACTATGGTATGTGCGTTGATACAAGCAGAGGGGCTGCTGCAAGGGACTTAATTGCAAAAGCTCTGAAGGGAGCCCTTGCACCTGC ACAGCAAGAGGTGACGATATTATTGTTGTTGAATTGTTGATAAAAGTTCATTAAAATGTAGTAAATAAAAATTCAAGGAATCTGGAGGATATGAAATCTT CTACGTTGAAAAGGGAAAATAAAATGACAGCAAAGCAGTAGATGCAAGATTGATGGGTCAAAGATGCCAATTCCTGCTCATATATTTCAAGGATAAGGCC TTGAAAATGTGCTTTACAGTTTACACCAAACAGAAGCTGAACTCCTAATCTTATCCCAAGTTATTTGCTGAGCCAACTAAGTTCACTTAAAGTGAGTGTT AAATGATAACCAGATGTAGCAAATAGTAGCATAGAATGTGCATTACAATAAGAATTAGTCTAGAGTATACCCAGGATTCATCATCAAGGACATACTATTT ACCTCTTAAAGAGACAGTTGCAGAACAATTGAGCAACAGACAAAAAGCTGATTCTGAACTGGCATCAGGCGTAACACACATGTCAGCATGCAAAGTGAGA TCTGGTTCTTATTTTGTCAAATGTTTGATGGAGGATAAGATGTTCGTAATTTCTTTATACAGCAAGTCCTGGTGGAGCTGGGCAATGATCCAAAGCTTGT ATATCACTGTGGACTGACATCGCGAAAGTTGCCAGAACTGGTGGAAAACAATCCCCTTATTGCAGTTGATTTTCTAACTAAGTTGATAAATTCTCCTGAA ATATCAGAATACTTTACAGTACTTGTCAATATGGACATGAGTCTACACTCAATGGAAGTTGTGAACAGGCTTACAACA BLAST |
| Tissue | pods |
| Gene name | LI_gene_189393; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_473438
| Blastp | CCR4-NOT transcription complex subunit 11 from Danio with 28.78% of identity |
|---|---|
| Blastx | CCR4-NOT transcription complex subunit 11 from Mus with 73.61% of identity |
| Eggnog | chromosome 2 open reading frame 29(ENOG410XPKT) |
| Kegg | Link to kegg annotations (336124) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432523.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |