| Id Trinity | TRINITY_DN52017_c2_g1_i21 |
|---|---|
| Name Transcript | Ll_transcript_473446 |
| Sequence | CGACACTCAAAATAGATTAGTTATTTAGCCAATATTACCGCAGTATAAAAATAAATAAGCTATCTTCAATGTGAACCATCATCACTATCATTTGATTCAG TCATATAGTCCCAACTCAGTAGACGAAAGAAAACCCTAGCAACTTGAGATTCCTTGGGTCTCTCGATTTGCCCCAATTTCCCAAAAACCCTAATTTATCT CAATCTCCTCAGAATGAGCAGTATTCGTAGGTTGAGTGGCGAAGAATCGCAAGCACTCTACTCTCTCCTGAAAGCAGAACAACGCCCAATTCACGAGATC GTTTCCGAATTCAACTCCAACATCTCTCGCACTCGCCACTTCACTCTCTGTTCCTATCTCCTCATGCTTTTGCAGGACAACAAGATACTCAACACTACTC AGCGGTTAATTGCGTTTTCTTTGCTACTGGAGGCATATGCATCTCAGAAACCTGCTTCAAATCCATTCATAAGTTTTATCTTAAATGCTGCCTGTCATGA AGATTCAGAAAGAGTCGTGAGGGCATTTATTCTGCAGCTATTAGGTGTTGATGGATCCATCAGTGGCAAAGAGGTTATATTCTGTTTCATTCCTTAAAAA CACTAGTAAAATACATGGTTTAACCTATTAGAAGTGCTTACTGAGAAAATATATCAGAATTTATTTTTCTGTTCTACATATTTACAGTTGCAATTCATTT CTCACTATCTATCAGCTACATTTTCTTTGAACCTGTAATCTGGGAAGAGGAGGGTTGTAGATAATCTTATTAGGCATGTGCAAGATTTGAAATGGCAATG CTGCTACCTATTTATTTATAAGCAAATGATGTATTAACTAGAATGAGCAAGATAATACATATAATTGTAATACTGTTATTGCTACTTTGCAACAGCCACC CGTAGTCAAGTATGGACTATATACAGGAAGATTTAAAAGATATGCTTTGTTTTATGTAACTTGGATGTGTTTTGTTGGAGCATAGAAACTTTTAGCGGAT TGATATAGGAAATGAAATCGTTTTTTGGGGATTTACATGACTAGTTCATGTTATAAGAGATTGCTGGTTTCAGTGTTATCAAATGGTAGCCATGGTGGAG GGTGGTGGTTGTTCCAGGCAGAATGCCATTCCTCTTTTGGAAAAACCTGCTAAATGGCTAGGCTATTTGGTGTTCAGGAATCAGGACAGCCATGGCTGTA TGGAAGTGACAGTGTATGGCAGAAATAGCGGACATGGCACTCTTATCGTAATATTCATGCGATTCATATCTAGGAACGTCATAAAGTGAAGTGCCAGTGA TACAGAATAGGATTAGAATCGCAAATGACCCTGAAGCGCACAACCTGGTTCCTCTAAGAGACAATTAGGTTTTTTTCTGATTTTTTGAAGTTTTCCCAGG TATTGTGCTGGTCCACTGGCCCGGTTCTGAAAACTATAAAATTTGGCATTTCGTCACGTTTCTTAAGTGGGATAGGGATGTGAAGTGTCAAAAATACCTT TCACTTATTCTCTTTGTTGAATACTAAACTTTTTGAACCTATTATTATTTTAAGATTTGTTACTTTCTCTGCCATATTCCCTTCCCCAATATCAGTATCA TTGTTGCAGAATTGTAGTGCTATCGTATCTCAACTCCCTGGCTCACTTTTTTATTCACTCATCCCCTCCTCTCTTTCTTTTATTAAGCTTCAATTCTTCC ATTTTTTAAGTGGGTTTCAATGTGTCAAAGAAAAAGGAGGAGGCTGATATTACATGGAATCACTGTGAAAGTGTTCCACCCTACAGAGTCATGATAGAAT GTAATATTGTTGTAATGTAAATAGTTAAGTTTATTGGTTACTGATAAATATTTTACTTTAAAATGCTAATATCTATTATTTCTTTATTTGAGAATATATT TTATATTATTTTTAATTATTAGTCAGTATCTGGTGCTATTATTAATTTTTTCTTTATATATTGTATTTTTTAATTATTTTGTGTCAACCACCACAATGAT GTCCATTATTTTCCCACAATGCCACCGCAACGTCATGATGGTTGAACTTTGGCAAACATCATGGGCCGCCATCAACAACACGGGTGCACATCTGCTGTCC CACAATGAGTGCCACTCCGTGTGCCATGAGTTTGTGATTGGTTGAAACAATGTATTTAAGTTAAAATTTAATTATTAAATATTTTTCTGACCAGTTATAG CTTACGGCACATGGAGTGACATTCATTATGGGACAGAAGATGTGCCCCGACAACACTGGGTGGTTTTATTGTTCAAATATTTTCCTTTCAGTTTGTTTTG GGTTGTTTCATCACTTTCAGGGGCCAGCTTTGTTTGTTGAAGCTCTTACTCTCCTTCTATGTAGCCTTTTCATTTTCCCTCTATAAGAATACCTTCATAA AAGCTATACAACCTATACTTATTAATCTTTAACTTTCGTTTTAGATCGAAAAATTTGTAAATTGGATGTTCTTTGTTGTTCAAACATGCATCTAACGTGT TTTCAGTATGGGGATCTATAGTTGGTTTCTCTTTCAACATGCATCTAAATGTTTGTGTCATCTTTGTGTTGATAATTCATGGCATTATGTTTGCTGTTGC TGCATATTTGCTTCCTTACTTTCTCCTTGATGATATGTTTGTCTTTAGTTTTAAATTGTGGTGTTTTTCTATCACTGGAGGGTTGCAGTTTCTTAAACAG TCTGCTTCAGATTATGTGAAAGGATTCGACCAATCATTGCATGACTTCCCATCATTAGATCAGTTGCAGCAGCAGTTTCCTGATGATGTTCATCTTGAAC CGTATCATCACTTATTTAAAGATGGTTCTGTAAAAAATGTAGTCCCAGACCCTGATGTTCCCTCCAATTGTGATATAGATTCACCAGAGTTTGATTTGCA CCCCGGTTCAAAACCTAAAATTGGATCTGGTGATAAAGAGGAGGCAGTAGTTGGGTTGTTATCAAATTTTTCACTAGAAGGATTACGTCCTCACTGGATC AGGCCTATTCCACCAAGGCTCCCAATACTTGATGAGGAGCTTGTTTGGCTCAACCCCGATGACAATCATGAACTGATGTGGGACTACAGTATGTGCATTG ATACAAGCAGAGGAGCTGCAGTAAGGGACTTAATTGCAAATGCTCTGAAGGGAGCCCTTGCACCTGCTCAGCAAGAGAAAGTCCTTGTGGAGCTGGCTAA TGATCCAAAGCTTGTATATCACTGTGGACTGACACCAAGAAAGTTGCCTGAACTAGTGGAAAACAATCCCCTAATTGCAATCGACGTTCTTACTAAGTTG ATAAATTCTCCTGAAATAGCAGAATACTTTACAGTACTTGTCAATATGGACATGAGTCTACACTCAATGGAAGTTGTGAACAGGCTTACAACAGCAGTTG AACTTCCTTCAGAATTTATTCACATGTATATCACTAATTGTATATCATCCTGTGTGAACATCAAGGATAAGTACATGCAGAACAGGCTTGTGAGACTTGT TTGTGTTTTTCTGCAAAGCCTTATTCGAAATAACATCATCAATGTCAAAGATCTGTTCATTGAAGTTCAAGCGTTTTGTATTGAGTTTTCGCGAATTAGA GAGGCAGCTGCATTGTTCAGGCTTCTCAAGTCATTGGAATGATTGTTGTTAAAGGCTGTTCATTTTTTTCTCACTTCCTCTCCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_189393; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_473446
| Blastp | CCR4-NOT transcription complex subunit 11 from Homo with 61.85% of identity |
|---|---|
| Blastx | CCR4-NOT transcription complex subunit 11 from Homo with 70.26% of identity |
| Eggnog | chromosome 2 open reading frame 29(ENOG410XPKT) |
| Kegg | Link to kegg annotations (55571) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019432523.1) |
| Pfam | Uncharacterized conserved protein (DUF2363) (PF10155.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |