Ll_transcript_473918

• Id Trinity: TRINITY_DN52018_c1_g2_i2
• Name Transcript: Ll_transcript_473918
• Sequence: AATCTATTTCAAAATGTGCAATTATTCTTATCGAGAAGTGTTAATGGTAGAGCAATATCTTCTTGGCCTTAAACCCTAATTTTAAATAGACATTTTGAAG TGATTTAGACAGTAAAATATTATAGTAATCCAAACAAAAAGAGCGGAAGGGTTTAAGCGAAGTCCACACATTTCAATTCAATGAATACCTTACTGCCTCG TATTGGCGTCGGTCTCTGCACACCGCGACTCCTCCACCAACCACCACACTCTTCAAAAAAACCCTACAAACTCACTTCCGGCACCGTTTCTTTCTCCGTC ACCTGCTCCGCCAGCAAATGGGCCGAGCGTCTCGTTTCCGATTTCCAATTCACCGATGACACCTCCTCCGACAACCACCACTCCCATTCCTCCACCGCCA CTCTCAGCCCCTCTCTTCCTCCTCCTCCACTTGACCCTCCCGAGCGCCACCTCTCCATTCCTCTCGATTTCTACCAAATCCTCGGCGCCGAAACTCATTT CCTCGGCGATGGAATTCGGAGAGCCTACGAGGCTAAGTTCTCGAAACCTCCTCAGTATGCTTTCAGTAATGAAGCTTTAATTAGCCGTCGCCAAATTCTC GAAGCTGCTTTTGAAACCCTAGTTGACCCTGCTTCTAGGAGAGAGTATAATCAAAGCCTTATTGACGATGAAAATGGAACCATTCTCACTGAAGTCCCTT TCCACAAGGTTCCTGGAGCTTTGTGTGCATTACAAGAAGCTGGAGATACTGAGTTGGTGCTTCAGATTGGACATGATTTGCTTAAAGAGAGGTTGCCCAA GTCATTTAAGCAAGATGTTGTCTTGGCAATGGCACTTGCTTATGTTGACATCTCAAGGGATGCTATGGCTTTGTCTCCACCAGATTTCACTGTGGGCTGC GAGATGTTGGAGAGGGCTTTGAAGCTTTTGCAGGAAGAAGGGGCAAGCAGTCTAGCACCAGATTTACAAGCACAAATAGATGAGACACTAGAAGAGATAA CTCCACGTTGTGTTTTGGAACTCCTAGCCTTGCCTCTTGGTGATGAACATCGAGTACGCAGGGAGGAAGGTCTTCAGGGTGTCCATAACATTCTATGGAC AGTTGGAGGAGGGGGAGCTGCAGCAATTGCTGGGGGTTTCACTCGTGAAGATTTCATGAATGAGGCATTCTTGCATATGACAGCATCTGAACAGGTTGAC CTTTTTGTAGCCACACCAAGTAATATTCCTGCTGAAAGTTTTGAAGTGTATGGAGTGGCACTTGCTCTTGTTGCACAAGCCATTGTAGCTAAAAAACCAC ATCTTATCCAAGATGCTGATAACTTATTCCAACAACTACAACAAATTAAGGTAGGTACCGCAAGAGATCCTTCCTCTGTTTATACTCCCGAGGAGAAGAG AGAGGTTGATTTTGCTTTGGAGAGGGGCTTCTGTGCACTGCTTGTTGGGGACCTTGATCAGTGTCGGTCATTGTTGGGACTAGACAATGAAAGCTCTACT TATAGAAACCCATCTATTATAGAATTTGTTATGGAAAATGCAAAGGGTGATGAAGACAACGATCTTCCTGGAATCTGTAAATTGTTGGAGACATGGTTGA TGGAGGTGGTTTTTCCCAGATTTAGAGATACTAAAGACACAACATTCAAGCTTGGAGATTACTATGATGATCCTACTGTGCTCAGATATCTAGAGAAGGT GGAGGGTGTTGGTCGATCACCCTTGGCGGCTGCAGCGGCCATAGCAAAAATTGGAGCTGAGGCTACTGTTGTTATTGGCCATGTCAGGGATAGTGCAATA AACACATTGAAGAAGGTATTTCCTGTTGGTTCTGAAGATGAAATTTTGAAACATCAAGAAAATGGTGAGAAAGATAATTCCAGTCTTTCTGAAGGTGAAA GTCATGTGATATTATCAGCTCAAGATATATCGGCCAATGTTGAGGTTTCTGGAATAAAAAATTCTGCTGATAGTAGTGAATGTACTACTGATGAAATTAA AGATGCAAGTGTGAAGATAATGTGTGCTGGTGTTGTAATTGGACTTGTGACTTTGGTTGGCCTTAAGTTTCTACCTGCTAGGAATGCCTTTTCTACCCTA CGCAAAATGACTGGTTCAGCAGTGGCATCAGATACTATCAACTTAGGTTCCCTACAAGAGGAAGAATTCAGAGAGCAACTTCCAAAAATGGATGCAAGGG TTGCAGAAGCTCTAGTTCAGAAATGGCAAAATATCAAATCCCATGCTTTTGGACCTGACCATTACCTAGGAAGATTGCAAGAGGTTTTGGATGGTGACAT GTTGAAGATATGGACTGATCGAGCAGCTGAGATTGCAGAGCGTGGTTGGTCATATGACTACACCTTGGAGGACCTCAATATCGATAGCGTGACTATATCA CAGAATGGACTCCGTGCGGTGGTGGAAACCACTCTTAAAGAGTCGACGCACCTCACTGCTGTAGGCCATCCACAACATGACACTCCAAACATCAGAACCT ACACAACAAGATATGTGATGTCTTTTGCAGGTTCAGGGTGGAAAATTGTTGAAGGATCTGTCCTTGAGTCATAATTTTTATCTTGTAAATCATATATATT TGGCTATCACATGTTAATTAATCTAGGTGATACTTCCTATCTAACATCTACTTGTTTATTTTTCACTAAGGGAAATTTTGTTGCTACAAATTGCCATATA GCATGGGGGGAGGGAAATGGATTATTGTAAAAAATGAAATAAAATATTACAAATTATATTTATTAAGATTCTAGTAATTCAAATATAAGATGAAGAAATA AAAATGGATGGAAATGTG
• Tissue: pods
• Gene name: LI_gene_189399;
• Additional information: details;

Expression of Ll_transcript_473918

FPKM

• PAB: 0.8
• PNAB: 7.1
• PS1: 4.7
• PS2: 3.7
• PS3: 4.9
• PW1: 5.4
• PW2: 4.3
• PW3: 3.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473918

• Blastp: Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic from Arabidopsis with 59.16% of identity
• Blastx: Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, chloroplastic from Arabidopsis with 57.91% of identity
• Eggnog: DnaJ domain protein(ENOG410YJYY)
• Kegg: Link to kegg annotations (AT5G42480)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458561.1)
• Pfam: Protein of unknown function (DUF4101) (PF13355.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;