| Id Trinity | TRINITY_DN52019_c1_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_471874 |
| Sequence | TTTTACTAATACTAGCTTTATTTATAAACCTCTTCTAAATCTCCTTCCCAGTTTTTCCATGCCAAGTTGCAAACTTTACTAGCACCAATACTCTTTTTCT ACCTTTGATTATAACTGTGTTGGAGGGTGGAGAAGGATGGCTATGGCTGTGGCTCATCACAGGGAAAGTAGCAGCAACAACAGTGGTAGCATTGACAAGC ACCTTGATTCAATTTCTGGGAAGTATGTAAGGTACACTGCTGAACAAGTTGAAGCTTTGGAAAGAGTTTATGCTGAGTGTCCCAAACCTAGCTCCCTAAG GAGGCAACAGTTAATCAGAGAGTGCCCCATTCTTTCTAATATTGATCCAAAGCAAATTAAGGTTTGGTTCCAGAATAGAAGGTGTAGAGAGAAGCAAAGA AAAGAAGCTTCACGGCTTCAGAGTGTGAACAGGAAGCTTTCAGCAATGAACAAGTTGTTGATGGAGGAGAATGACCGGTTGCAGAAACAGGTGTCACAGC TCGTGTGTGAGAATGGTTTTATGAGGCAGCAATTGCATACTACACCAGCAGCAGCTACAAATGCTAGTTCTGATTCAGTGGTTACCACTACTCAACATTC TTTGAGAGATGCTAATAACCCTGCTGGACTCCTATCAATTGCAGAGGAGACCTTGACAGAGTTCCTTTCCAAGGCTACAGGAACGGCTGTCGATTGGGTC CAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCTATTTCACAAAGTTGCGGTGGAGTGGCAGCTAGAGCCTGCGGTCTTGTTAGTT TAGAACCTATGAAGATTGCGGAGATCCTAAAAGATCGTCTGTCATGGTTTCGGGAATGCCGGAGCCTAGAAGTTTTCACAATGTTCCCTGCTGGAAATGG TGGGACCATTGAACTTGTTTACACACAGACATATGCTCCAACAACTCTGGCTCCTTCCCGGGATTTCTGGACTCTGAGATACACTACAACTTTGGAAAAT GGCAGTCTCGTGGTTTGCGAGAGGTCACTGTCTGGTACAGGCACTGGCCCTAATCCAGCTGCCGCTGCTCAGTTTGTGAGGGCTGAAATGCTCCCTAGTG GCTACTTGATTCGACCATGTGAAGGTGGAGGATCAATCATCCACATTGTAGACCACCTAAATCTTCAGGCATGGAGTGTACCAGACGTGTTGCGACCACT TTATGAATCAGCAAAAATGGTAGCTCAGAAAATGACAATTGCGGCACTTCGCTATATCAGGCAAATAGCCCAGGAAACTAGTGGTGAAGTGGTATATGGC TTGGGTAGGCAACCAGCTGTTCTGAGAACTTTCAGCCAAAGGTTGAGTAGAGGCTTCAACAATGCTGTCAATGGATTCAATGACGATGGCTGGTCTGTAT TGAACTGTGGTGCTGTAGAGGATGTAATCATTACAGTCAATTCCACCAAGAATTCGATTGACACTTCTAATCCAGCTAGTTCCCTTACTTTCTTTGGAGG AATTCTGTGTGCAAAGGCTTCTATGTTACTCCAAAACGTCCCTCCATCAGTTTTGATCCGCTTTCTGAGGGAGCATCGCTCGGAGTGGGCTGATTTTAAT GTCGATGCATATTCTGCTGCTTCACTTAAAGCTGGCTCATATGCCTCTCCTGAAATGAGGCCTATAAAGTTCACTGGCAATCAAATAATCATGCCACTTG GTCATACAATTGAACACGAAGAGATGCTAGAAGTTATCCGGCTTGAAGGTCACTCTCTTGCTCAGGAGGATGCTTTTGCTTCTAGGGACATTCATCTCTT ACAGATATGTAGTGGAGTTGATGAAAATTCAGCAGGGCTTTGTTCTGAGCTCATATTTGCTCCAATCAATGAAATGTTCCCAGATGATGCTCCATTGGTG CCTTCCGGTTTCCGCATTATCCCACTGGATTCAAAACCAGGTGGTAAAAATGATGTGACAACTGCAAACGAAACCTTGGATTTGACATCTGGTCTTGAAG TTAGCCCATCAACAAACAACGCTGATGGAGATGCATCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_189409; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_471874
| Blastp | Homeobox-leucine zipper protein REVOLUTA from Arabidopsis with 82.86% of identity |
|---|---|
| Blastx | Homeobox-leucine zipper protein REVOLUTA from Arabidopsis with 82.86% of identity |
| Eggnog | Homeobox-leucine zipper protein(ENOG410ZJBV) |
| Kegg | Link to kegg annotations (AT5G60690) |
| CantataDB | - |
| Mirbase | cln-MIR166 (MI0022568) |
| Ncbi protein | Link to NCBI protein (XP_016187430.1) |
| Pfam | Homeobox domain (PF00046.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |