Ll_transcript_471872

• Id Trinity: TRINITY_DN52019_c1_g4_i7
• Name Transcript: Ll_transcript_471872
• Sequence: ATGAACAAGTTGTTGATGGAGGAAAACAATCGGTTGCAGAAGCAGGTGTCACAGTTGGTATGCGAAAATGGCTATATGCGGCAGCAATTGCGTAGTCCAT CAACACGAGCTGCTGATGCAACTTGTGATTCGGCGGTTACTACTCCCCAGCATTATATGAGAGATGCTAACACTCCTGCTGGATTTCTATCAGTTGCAGA GGAGACTTTGACAGAGTTCCTTTCAAAGGCTACAGGAACCGCTGTTGACTGGGTCCAGATGCCCGGAATGAAGCCTGGTCCAGAGTCGGTTGGGATGTTT GCCATTTCACAAAGTTGCACTGGAGTGGCAGCTCGAGCTTGTGGTCTTGTTAGTTTAGAACCTACAAAGGTTGCGGACATCCTAAAAGACCGCTTATCTT GGTTTCGAGAGTGTCGGAGTTTAGAAGTTTTCACAACGGTCCCTGCTGGAAATGGAGGGACAATTGAACTTGTTTACACACAGACATATGCCCCAACCAC ACTGGCTCCTGCTCGGGATTTCTGGACACTAAGATACACAACAACTTTAGACAATGGCAGTCTCGTGGTTTGTGAGAGGTCACTGTCTGGTTCTGGTGCT GGGCCTAATGCAGCAGCAGCCGCTCAGTTTGTGAGGGCTGAAGTGCTATCTAGTGGCTACTTGATTCGACCATGTGAAGGTGGAGGATCAATCATTCACA TTGTAGACCACCTAAACCTTCAGCCTTGGAGTGTGCCAGAAGTTCTGCAACCACTTTATGAATCATCAAAAGTGGTAGCTCAGAAAATGACAATTGCGGT AAGTTCAATATTGTTAAGTCACGAAGTAAGGTTCTCTTGATAACTTGGTTATTATGTAAACAATATTCTAACTTTGAACTGCAATCATTTGAGCAAATCT GTGAAGTATATCAGTCTGCATTTGAGGTAGCCTCTGGCATATGATGTTAGACTATGCAGCGGATAAATCCTCTAGAAGTTGTTGTTGCTCTATGGTCATT GGATTAGATATCTCCATGTTATTTTTCTTAATTCTCTTCTGTTTTAACATTCTTCATGCCAATTTCAACAAGTATATCACTATTTTTTCTATAACCATCT GTATTTACTCTAATTCCTATCTCCCATGCCTTATTCTAAGAAGTCGGATAATGATTCAATGGCTTTTGCATAGGCACTTCGCCATATCAGGCAAATAGCT CAGGAAACAAGTGGTGAAGTGGTATATGGCTTGGGTAGGCAACCAGCTGTTCTGAGAACTTTCAGCCAAAGGTTGAGCAGAGGCTTCAACCATGCTGTCA ATGGATTCAATGATGACGGCTGGTCTGTATTGAACTGTGATGGTGCTGAGGATGTAATTATTTCAGTTAATTCAACCAAGAATTTGAGTGGTACTTCTAA TCTAGCTACACCCCTTACTTCCCTTGGAGGAGTTCTCTGTGCTAAAGCTTCTATGTTACTCCAGAACGTCCCTCCAGCAGCTTTGATTCGCTTTCTGAGG GAGCATCGCTCAGAGTGGGCTGATTTTAACGTTGATGCCTATTCTGCCGCTTCACTTAAAGATGGCTCCAATGCATATCCTGGAATGAGGCCTACAAGTT TCACCGGCAATCAAATTATCATGCCACTTGGGCACACAATTGAACACGAAGAGGTATTCCCTTGCCCAGGCACGGATTCCAGTTGGAAGTGCATCTTCAT CCATGTGATGGGATCCATTAGAGAGACTTTGGCTTGTGTGACATAAAGTTCTTTATGATTCCTTAGATAGTAGATGCATACTTGCGTTGAGCTAAGATTT GGTATATATCTGCGCCTGTTATGGTACTCCGTAGAGTGATGTCAACCATTTGTTCTCAGATCACTTTAGGCACTCATTTTCTCAAGCAAAACTTTTTGCT AATTTGTCTTTACATTTCAGATGCTTGAAGTTGTCCGGCTTGAAGGTCACTCTCTTGCTCAAGAAGATGCTTTTGTTTCTAGGGACATTCATCTCTTACA GATATGCAGTGGAATTGATGAGAATTCTGTGGGGCCTTGTTCTGAGCTCATATTTGCTCCAATTGATGAAATGTTTCCAGATGATGCTCCATTGGTGGCT TCCGGTTTCCGCATTATCCCCTTGGATTCAAAACCAGGTGATAAAAAGGATGCGACAACAGGAAATCGAACCTTGGATTTGACATCGGGTCTTGAAGTAG GCCTGGCAGCAAGCCATGCTGAAGGAGATGCATCATCATGTTATAGCAATCGATCCGTGTTGACTATAGCCTTTCAGTTTCCTTTTGACAGTAGTCTGCA GGATAATGTTGTAGCCATGGCACTTCAGTACGTCCGCAGTGTGATCTCTTCTGTGCAGAGGGTTGCCATGGCTATATCTCCATCTGGTATAGACCCGGCT GTCAGTGCAAAACTCTCCCTGGGCTCTCCTGAAGCTTTTACGCTAGCTCAGTGGATCTGTCAGAGTTATAGTTATCATTTGGGGACAGAGTTACTGAGAT CTGATACTCTTGTTGGGGACTCGGTACTGAAAAATTTATGGCATCACCAGGATGCTATTTTGTGCTGTTCTTTGAAGTCGCAGCCGATGCTCATCTTTGC AAACCAGGCTGGTCTTGATATGATGGAAACAACTCTAGTTGCTTTACAAGACATAACATTAGATAAAATATTTGATGAGTCTGGACGCAAAACATTGTAC GCAGGCTTTGCCAAG
• Tissue: pods
• Gene name: LI_gene_189411;
• Additional information: details;

Expression of Ll_transcript_471872

FPKM

• PAB: 0.1
• PNAB: 0.1
• PS1: 0
• PS2: 1.1
• PS3: 0.8
• PW1: 0
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_471872

• Blastp: Homeobox-leucine zipper protein REVOLUTA from Arabidopsis with 74.53% of identity
• Blastx: Homeobox-leucine zipper protein REVOLUTA from Arabidopsis with 84.21% of identity
• Eggnog: Homeobox-leucine zipper protein(ENOG410ZJBV)
• Kegg: Link to kegg annotations (AT5G60690)
• CantataDB: Link to cantataDB annotations (CNT0000180)
• Mirbase: cln-MIR166 (MI0022568)
• Ncbi protein: Link to NCBI protein (XP_019447870.1)
• Pfam: MEKHLA domain (PF08670.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;