Ll_transcript_473286

• Id Trinity: TRINITY_DN52028_c3_g9_i1
• Name Transcript: Ll_transcript_473286
• Sequence: CTTCTTCCTCCTCCTCCTCCTCCAAACCCTTACTATTACCCTCCTCCTCCTCCTCCTCCTCCTCCGGGTTACTATTATAACTCAACAAATCCACAATCTT ATTATCACTCTTCTTCTTCTCATCACCCTTTCTATCCTAATCAACACCATCAACGTGGTTGCACCACCTTGACTCCCCCAACTATACCCTATGTTGACCA TCAAACTGCCAAGAAGATAAGGAATAATGTTAATTTGCATAAACATACTCTCTCCCTTCAACTCGATCCACTCAACCCTAATCACCACTTGCTTTCTTTC GTTTTCGACGCCCTCTCTCATGGAAGCATTACTATCTTCTACTTGGCCAAAGAGGAAGAACAATGTAGATTTATTCCACTATACCCTGATGCATTTGAGC CAATCACATTCCCCTTTCAGAAAGGAGCTGGCCAGAAATTTTGTCAGCCTTCAGGAACTGGCATTGACTTGGGTTTCTTTGAGTTGGATGATCTTTCAAA GCCCTCACCTCAGGAAGATGTATTTCCTCTTGTAATATGTGCTGAAACACGTGCCGAAACTGCTTCGGCAGATGAAAATCCTAGCAATTCCATGCTAGAT TCATCGCCTCGCATGCAAATAACTCAAGCCGTCTTGGAGAAAAGAAATGGTAGTGATCCTTTCCAGGTAAAAGTAGTCAGGCAGATTCTGTGGATTGACA ATGTTCGTTATGAGCTGAGAGAGCTATATGGAATAGGAGGATCAACAGCAGCAGATTTTGATGATACTGATCCTGGGAAAGAATGTGTAATATGCATGAC TGAACCAAAGGACACCGCTGTCTTACCTTGCCGACACATGGTAAGATTTCTGGTAAACCTGATTTATGTAAAGTGCTAAGAGTCATTTTTATTTTAAGGC TCTCAACGTCTTTTATGTGTATTGAACATATGATGTATAAAGGATGATGGCTCATACACACAGCCTTACCATGATTGTGTTAGGAGTCCCATATTGAGTA GAATAGCCAACTCAATGTGGTACTTAAACCATGAGGCTCTTCCACCTAATAGACTAGTCTTTTGGTTGAGTTCTCCTTGTATGCTTAAGTCCTAATAGAT TGCTATCTGAAAGGGAATGTTTAGAAAAAGCTGAGTTGCCTGATGATCCTTATGCCACCTGAATTTTCTTTTCTCTCTCCTGCCACTATGACGGTGCCAC CCCATTCAAAATGTTTCCGAAGTTGTGGTCTCACTAATCATCATCTAATTGTTCATGTATAGTTTAGAATCATAGAAACCCAATGTTATATGCGTGTACT AGTATATAAGTATATACCATTGGAGAAGTTGATCTTTCTAGTGACTAGCAGGGGAATATACTATTTTTCAATAGAGATGCTCGCAGATAGTTATGTTTTA TTAACTTCTTCATGTTGCATGTATACTATTTTGCATTATATTCAGTTTACCGCTTTGACTATTCTCACGATACATATGTTGTATTGTCCAGTGCATGTGC AGTGAGTGTGCCAAAGCTTTGAGGCTTCAATCAAACAAATGCCCTATTTGCCGCCAAGCTATTGAGGAACTTATAGAGATCAAGATAAGTGAGGGCGACC AGTGACATCTTCCCCCGGATGTGAAGTTGAACAGCATGGTATTTCCGTCGAAGTCTTTCCTATATTTAAAAAAAAAAACTCCCCTTTTCACTCTGCAGTC TGGTACTATATAGCATTTTTCTTCTTTTTTGTAAATTGCAATCGATTATCTGTTTATAGTTCATATGTAATGAGTTTGAAAGAAAATTAGATCATAAGCA CTTTTTTGTGTCATTAAATGTTACTTTTGTGCCGTCTACGTTGTACGGTCGATTGTTTATATTTTGCTTTACTTTTTGTATGTTGTGATATTTGTAGACC TGGTTTGCTTGTTGACAAACCTCTATGTATCATGAAGGTGAAGATTCCTCAATCCTCTCCAATTATGTTTGGAAAGTATTCATATAAGTCATAGTTTTCA ACAATCTTTCTTCTCCTTTATGCCTTTTGCTGAAATGGTTCATATAAGTCTATAGTTTTCAACTAATATTTGCATTCAGAACTGTTTATGCAAATCAGAA TCTTCAAAGCTTTGACAAGTTTCTGGACATCAACTTTTGAACAAGTGAAGTTAGGAAACCCATGCAACCATTTTATATGAAGTTGGAATCAGAATCTTAA ATGCTATCATACTTTCTTTATCTCTGCGTTTAATTTGGAAGGGAATGGCTTTCACTGTTCCCTATTTCGAATATTCTTCAATATTGTTCAAACATTAGC
• Tissue: pods
• Gene name: LI_gene_189492;
• Additional information: details;

Expression of Ll_transcript_473286

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 1.1
• PS2: 0.2
• PS3: 0.3
• PW1: 1.6
• PW2: 1.4
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473286

• Blastp: Probable E3 ubiquitin-protein ligase LUL3 from Arabidopsis with 53.28% of identity
• Blastx: Probable E3 ubiquitin-protein ligase LUL3 from Arabidopsis with 59.29% of identity
• Eggnog: RING finger(ENOG410XRAE)
• Kegg: Link to kegg annotations (AT5G19080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437198.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;