Ll_transcript_473291

• Id Trinity: TRINITY_DN52028_c3_g9_i2
• Name Transcript: Ll_transcript_473291
• Sequence: CTTCTTCCTCCTCCTCCTCCTCCAAACCCTTACTATTACCCTCCTCCTCCTCCTCCTCCTCCTCCGGGTTACTATTATAACTCAACAAATCCACAATCTT ATTATCACTCTTCTTCTTCTCATCACCCTTTCTATCCTAATCAACACCATCAACGTGGTTGCACCACCTTGACTCCCCCAACTATACCCTATGTTGACCA TCAAACTGCCAAGAAGATAAGGAATAATGTTAATTTGCATAAACATACTCTCTCCCTTCAACTCGATCCACTCAACCCTAATCACCACTTGCTTTCTTTC GTTTTCGACGCCCTCTCTCATGGAAGCATTACTATCTTCTACTTGGCCAAAGAGGAAGAACAATGTAGATTTATTCCACTATACCCTGATGCATTTGAGC CAATCACATTCCCCTTTCAGAAAGGAGCTGGCCAGAAATTTTGTCAGCCTTCAGGAACTGGCATTGACTTGGGTTTCTTTGAGTTGGATGATCTTTCAAA GCCCTCACCTCAGGAAGATGTATTTCCTCTTGTAATATGTGCTGAAACACGTGCCGAAACTGCTTCGGCAGATGAAAATCCTAGCAATTCCATGCTAGAT TCATCGCCTCGCATGCAAATAACTCAAGCCGTCTTGGAGAAAAGAAATGGTAGTGATCCTTTCCAGGTAAAAGTAGTCAGGCAGATTCTGTGGATTGACA ATGTTCGTTATGAGCTGAGAGAGCTATATGGAATAGGAGGATCAACAGCAGCAGATTTTGATGATACTGATCCTGGGAAAGAATGTGTAATATGCATGAC TGAACCAAAGGACACCGCTGTCTTACCTTGCCGACACATGTGCATGTGCAGTGAGTGTGCCAAAGCTTTGAGGCTTCAATCAAACAAATGCCCTATTTGC CGCCAAGCTATTGAGGAACTTATAGAGATCAAGATAAGTGAGGGCGACCAGTGACATCTTCCCCCGGATGTGAAGTTGAACAGCATGGTATTTCCGTCGA AGTCTTTCCTATATTTAAAAAAAAAAACTCCCCTTTTCACTCTGCAGTCTGGTACTATATAGCATTTTTCTTCTTTTTTGTAAATTGCAATCGATTATCT GTTTATAGTTCATATGTAATGAGTTTGAAAGAAAATTAGATCATAAGCACTTTTTTGTGTCATTAAATGTTACTTTTGTGCCGTCTACGTTGTACGGTCG ATTGTTTATATTTTGCTTTACTTTTTGTATGTTGTGATATTTGTAGACCTGGTTTGCTTGTTGACAAACCTCTATGTATCATGAAGGTGAAGATTCCTCA ATCCTCTCCAATTATGTTTGGAAAGTATTCATATAAGTCATAGTTTTCAACAATCTTTCTTCTCCTTTATGCCTTTTGCTGAAATGGTTCATATAAGTCT ATAGTTTTCAACTAATATTTGCATTCAGAACTGTTTATGCAAATCAGAATCTTCAAAGCTTTGACAAGTTTCTGGACATCAACTTTTGAACAAGTGAAGT TAGGAAACCCATGCAACCATTTTATATGAAGTTGGAATCAGAATCTTAAATGCTATCATACTTTCTTTATCTCTGCGTTTAATTTGGAAGGGAATGGCTT TCACTGTTCCCTATTTCGAATATTCTTCAATATTGTTCAAACATTAGC
• Tissue: pods
• Gene name: LI_gene_189492;
• Additional information: details;

Expression of Ll_transcript_473291

FPKM

• PAB: 19.7
• PNAB: 9.6
• PS1: 14.8
• PS2: 7.8
• PS3: 8.8
• PW1: 20.8
• PW2: 21.9
• PW3: 9.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_473291

• Blastp: Probable E3 ubiquitin-protein ligase LUL3 from Arabidopsis with 54.02% of identity
• Blastx: Probable E3 ubiquitin-protein ligase LUL3 from Arabidopsis with 59.25% of identity
• Eggnog: RING finger(ENOG410XRAE)
• Kegg: Link to kegg annotations (AT5G19080)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437198.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;