Ll_transcript_472392

• Id Trinity: TRINITY_DN52031_c3_g2_i2
• Name Transcript: Ll_transcript_472392
• Sequence: ACTTTTTCTTCTTCAAAACTGTGCTACACACGATGGAAGAACATGATCTAATATTCTAATCCGACATTAAACTTCAACCTCCCCTCTCTCTAAAAACAAC GTAAGACCATGTCCATAAACTTGAACTCTCATGCCTTCGCCGACAACCCTCTTCTCCGATCAAAACCCACCGACCCCCTTTCTCCCAAAGCAGCTCTTCA AGCTCTTAACATACGAATCCTCGAAACCAACACTCTTTCTTCTTCTTCCCCGAATTTCAAGGTGCTCCCTTTCAAAAACAGCAGGCCCTTAGCATCTTCC ACCAGTGACTCACCGGTGCCGGTTTTTCAATTGGGTTGGATCAGTTTGGAAGATCTTAAGGCTTTTTTCGAAAACTCGGGTTCCCAGTTGTGTGCAGAGT GGTTGGTGTATCTGGGTTCTAGTGCTGAAGACGATGCCGTATACTGGGCAATCGATGTTTCTGATCATAGTAACTTGGTAACTGAATTGTGTAGCAGGGA GATGGGTTTTGTTGCTCTTCTAACTCTCATGGTTGCTAGTGACTGGGAAGATTTGCAAGCAATGCGAAATTTGGCTATTGCTGGTCACGCCAAGGCACTA CTAGAATGGCATAATATTTCACGATTTTGTGGACATTGTGGAGGGAAAACAGTTCCAATCGAAGCTGGGAGACGGAAGCAATGTTCAAATGATTCTTGCA AAAAGAGGATATATCCACGTGTTGATCCGGCTGTCATTATGCTAGTCATTGATCGTGAAAATGACCGTGCTCTTTTGGCTTCAAGACCCAAGCTTATACC TCGATTATGGAGCTGCTTAGCAGGTTTTACAGAGCCTGGTGAAAGCTTGGAGGAAGCTGTGAGAAGAGAAACATTGGAAGAGACTAGTATTGAAGTAGGA GAAGTTGTATACCACAGTTCTCAGCCATGGCCTGTTGGACCTAATAGCATTCCATGCCAGCTGATGGTTGGGTTCTTTGCCTACGCAAAATCCCTTGAAA TAACTGTAGACAAGAAAGAGTTAGAAGATGCCCAATGGTACAGTAGAGAAGATGTAAGAAAAGCATTAACATTTGGTGAATACAAGAAATCCCAAAGAAA CGCAGCAGTGAAGGTAGAACAAATGTGTAAGGGAGTTGAAAAGAGTCAGAGATTGGCTGCAGATTCGAACACTGAAAGTGAGGAACTCGCTCCAATGTTT GTTCCTGGACCCTATGCAATAGCTCATCACCTTATTTCTTCTTGGGCCTTCCCAGATCCATAAGTACTGAATGCTGTTGAGTTCCATTCCAAACAATCTT GAGTCACTGTGTCAAATTTGTAAGGGTGGCTAAATTCTTTTTCAATGCACCTTTTGGAAATAAAGCCTATCTTATTGCTGTCATGTATAATTTATCTTCA AGAATGTAGACAGTTCCAAAATGTAACAGGTGATGGAATTTTCTCATCAAATTGTTAATTTATCAGCTCAACTTCTGGTTTAGCACTGTTTTTTAGTGTA ACCCAAGATATATAAAATCATGAATATTTAGTTTTTT
• Tissue: pods
• Gene name: LI_gene_189507;
• Additional information: details;

Expression of Ll_transcript_472392

FPKM

• PAB: 24.4
• PNAB: 19.6
• PS1: 16.5
• PS2: 7.6
• PS3: 16
• PW1: 17
• PW2: 19.6
• PW3: 15.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_472392

• Blastp: Nudix hydrolase 19, chloroplastic from Arabidopsis with 63.14% of identity
• Blastx: Nudix hydrolase 19, chloroplastic from Arabidopsis with 62.34% of identity
• Eggnog: NADH pyrophosphatase(COG2816)
• Kegg: Link to kegg annotations (AT5G20070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464610.1)
• Pfam: NADH pyrophosphatase-like rudimentary NUDIX domain (PF09296.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;