| Id Trinity | TRINITY_DN52031_c3_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_472393 |
| Sequence | ACTTTTTCTTCTTCAAAACTGTGCTACACACGATGGAAGAACATGATCTAATATTCTAATCCGACATTAAACTTCAACCTCCCCTCTCTCTAAAAACAAC GTAAGACCATGTCCATAAACTTGAACTCTCATGCCTTCGCCGACAACCCTCTTCTCCGATCAAAACCCACCGACCCCCTTTCTCCCAAAGCAGCTCTTCA AGCTCTTAACATACGAATCCTCGAAACCAACACTCTTTCTTCTTCTTCCCCGAATTTCAAGGTGCTCCCTTTCAAAAACAGCAGGCCCTTAGCATCTTCC ACCAGTGACTCACCGGTGCCGGTTTTTCAATTGGGTTGGATCAGTTTGGAAGATCTTAAGGCTTTTTTCGAAAACTCGGGTTCCCAGTTGTGTGCAGAGT GGTTGGTGTATCTGGGTTCTAGTGCTGAAGACGATGCCGTATACTGGGCAATCGATGTTTCTGATCATAGTAACTTGGTAACTGAATTGTGTAGCAGGGA GATGGGTTTTGTTGCTCTTCTAACTCTCATGGTTGCTAGTGACTGGGAAGATTTGCAAGCAATGCGAAATTTGGCTATTGCTGGTCACGCCAAGGCACTA CTAGAATGGCATAATATTTCACGATTTTGTGGACATTGTGGAGGGAAAACAGTTCCAATCGAAGCTGGGAGACGGAAGCAATGTTCAAATGATTCTTGCA AAAAGAGGATATATCCACGTGTTGATCCGGCTGTCATTATGCTAGTCATTGATCGTGAAAATGACCGTGCTCTTTTGGCTTCAAGACCCAAGCTTATACC TCGATTATGGAGCTGCTTAGCAGGTTTTACAGAGCCTGGTGAAAGCTTGGAGGAAGCTGTGAGAAGAGAAACATTGGAAGAGACTAGTATTGAAGTAGGA GAAGTTGTATACCACAGTTCTCAGCCATGGCCTGTTGGACCTAATAGCATTCCATGCCAGCTGATGGTTGGGTTCTTTGCCTACGCAAAATCCCTTGAAA TAACTGTAGACAAGAAAGAGTTAGAAGGTACATTCACTTCCAATGTTTAATTGAATTTACCTATTAAGCCCGCTTTTACTTTGATTTATGTGCACCAATT CAAGTGGCGATTTAACTTGTAAACACCTATTTAGCTTAAATATTCTTGCAGTATTTTATTTCCTCTAAATGAAACCTCCCGCAACTTGAACCCATAACCT CAGGGTTTATAGTTATTTGTTCTATTGAGTCGCTACTACTAAGCTAGAAGTGTAGCTGAAATCTCAACCTGCACAACCCATGGAGTATGCAAGTATTTAT GTACTAATGATTTAGTGTTTTCTTTTTCCACCGAGTTAGCATCAAAACAATAGAATGATATGTAGCAAATTGTTCAGATATCATGACAAAATTGTGTTGT GATAAATGACAAATAACTGTTGAGCTTTCTTTGTCTGTGGAAACACTGACAAAAAGAGTGGGGAAGATAGAAAAACAGTGGATGAAGCCTGAAGAAAATA AAGATGGTTTTACTTCAGTGTTGTTTTCCTATTTTGGTGCTGTACTTTTATCCATAATAAAACCACGCAATGTCTTTAACATCCTAACGCATATACTTCC TCCAATTTCCTTTGTTTTTTTCATTGGACTGTGACAAATGATGCTGCAACTTTTATCTAGATGCCCAATGGTACAGTAGAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_189507; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_472393
| Blastp | Nudix hydrolase 19, chloroplastic from Arabidopsis with 61.94% of identity |
|---|---|
| Blastx | Nudix hydrolase 19, chloroplastic from Arabidopsis with 62.06% of identity |
| Eggnog | NADH pyrophosphatase(COG2816) |
| Kegg | Link to kegg annotations (AT5G20070) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464610.1) |
| Pfam | NADH pyrophosphatase-like rudimentary NUDIX domain (PF09296.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |